Hippoglossus stenolepis (Pacific halibut): 118123228
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Entry
118123228 CDS
T08308
Symbol
rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118123228 (rbfox1)
Spliceosome [BR:
hsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118123228 (rbfox1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
118123228
NCBI-ProteinID:
XP_035036372
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Position
16:complement(22106212..22214610)
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AA seq
411 aa
AA seq
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MQHPGGTCVALPNVDACPQLSCAALTFMYLQQGNQDTPAPPDSSMAQAYPSAQFAPAPQN
GIPAEFTASHPHPHPHSHPHPHQHPAAPPDYTGVQASISEHPLNMYQSSQSHSDQGGSES
SSQTVTGTATQTDDAAQTDSQPPTQCVPECTDNKAQPKRLHVSNIPFRFRDPDLRQMFGQ
FGKILDVEIIFNERGSKGFGFVTFEHSVDADRAREKLHGTVVEGRKIEVNNATARVMTNK
KTVNPYANGWKLNPVVSAVYSPEFYAVPGFPYPAASAAAAYRGAHLRGRGRTVYNTFRAA
APPPHIPAYGGVVYQDGFYGADIYGGYAAYRYTQPTAATAAAFSDSYGRVYAADPYNHTL
TPAATYSVGAMNAFTPLTDAKTRSHADDVGLVLSSLQASIYRGGYSRFAPY
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatcctggaggaacatgcgtagcgttacccaacgtggacgcctgtccccagctg
tcctgcgccgccctcaccttcatgtatttacagcagggtaaccaggacacaccggcaccc
ccggactcatccatggcccaggcttacccatcagcccagtttgcccctgcaccccagaac
ggcattccagctgaattcacagcttcacacccccatccacatccacactcccacccacat
ccacaccagcacccagcagcaccaccggactatactggggtccaggcctccattagtgag
catccgctcaacatgtaccagtcctcgcagagccacagtgatcagggcgggtcagagtcc
agcagccagacggtcacaggcacagctacacagacagatgatgccgctcagacggacagt
cagccaccaacacagtgtgtacctgaatgcacagataacaaggcccaacccaagagactt
catgtctccaacatccccttcaggttcagagacccagatctcaggcaaatgttcggccaa
tttggcaaaatcttagatgtggaaatcatcttcaacgagcgcggctccaagggttttgga
ttcgtaacattcgagcacagtgtggatgccgacagagccagggagaaattacacggcacc
gtggtagaaggtcgtaaaatagaggtcaacaatgcaacagccagagtaatgacaaataag
aagacagtcaacccatatgcaaatggctggaagttaaatccagtggtcagcgctgtctac
agcccagaattctatgcagtaccaggttttccctacccagcagccagtgcagcagcagcg
tacagaggagcccacctacggggacgaggaaggacagtatacaatacgtttagggcagct
gctccgcctccccatattccagcttatggaggtgttgtttaccaggatggattttatggt
gcagatatttatggtggttatgctgcctacagatatacccaacctactgctgccacagct
gctgcattcagtgacagttacggacgagtatacgctgccgacccctacaaccacacactc
actccagcagccacatacagcgttggtgccatgaacgcgttcaccccactgacagatgcc
aaaactcggagtcatgctgacgacgtggggctggtgctgtcctctctccaggccagtata
taccggggaggctacagccgcttcgcaccctattag
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