Hippoglossus stenolepis (Pacific halibut): 124851567
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Entry
124851567 CDS
T08308
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
124851567
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124851567
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_5
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
124851567
NCBI-ProteinID:
XP_047195375
LinkDB
All DBs
Position
3:complement(1573942..1578085)
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AA seq
569 aa
AA seq
DB search
MAQQRPLERTEMAQQENQLDREMFCCSICLDLLKDPVTTGCGHSYCMSCINTHWDKEEER
GSYSCPQCRQTFTPRPVLGKNTMLADLVEELKKTGLQAAPADHCYAGPEDVACDVCTGRK
LKALKSCLVCLASYCEKHLQPHLQSAPLKKHKLVEPSEKLQENICSRHDEVMKMFCRTDQ
QCICYLCSVEEHKDHDTVSAAAEWTERQRELGLRRQTIQQRVQDTEKDVKLLPLEEEAVS
GSADKAVKDSEKIFTELIRLLEERSSDVYQQIRSQQETEVSRVRELQERLEQEITELKRK
DHELKQLSDTEDHNQFLHNYPSLSPLSESTHSSSIRIRPLRTFEDVTAAVSQVRGRLQDI
LSETETEILQIVSQVDVLLPQPEPETRADFLRYSQKITLDPNTVNEDLLLSEGNRKVTVM
SEEQYYSNHPDRFTGWPQVLSRERLTGRCYWEVKMRRGGRVGVAVTYKNIRRAGGSDECG
FGLNNKSWSLSCYGNSYDFYYNSINTPVSGPVSSRVGVYLDHSAGVLSFYSVSDTMTLLH
RVQTTFTQPLYAGVGIYYDGDTAEFCKLK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagcgccccctggaacgcactgaaatggcgcagcaagaaaatcaactggac
agagaaatgttctgctgttcgatctgtctggatctactgaaggatccggtgactactggc
tgtggacacagctactgtatgagctgtattaacacccactgggacaaagaggaggagaga
ggaagctacagctgccctcagtgtagacagaccttcacaccgaggcctgtcctggggaaa
aacaccatgttagctgatttagtggaggagctgaagaagactggactccaagctgctcct
gctgatcactgctatgctggacctgaagatgtggcctgtgatgtctgcactgggagaaaa
ctgaaagctctcaagtcctgtttggtttgtttggcctcttattgtgaaaaacacctccag
cctcatcttcagtcagctccattgaagaagcacaagctggtggagccctcggagaagctc
caggagaacatctgctctcgtcacgacgaggtgatgaagatgttctgccgcactgatcag
cagtgtatctgttatctctgctctgtggaggaacataaagaccacgacacagtgtcagct
gcagcagaatggactgagaggcagagagagctcgggctgaggagacaaacaatccagcag
agagtccaggacacagagaaagatgtgaagctgcttccactggaggaggaggccgtcagt
ggctctgctgataaagcagtgaaggacagtgagaagatcttcactgagctgatccgtctg
ctggaggaaagaagctctgatgtttatcagcagatcagatcccagcaggaaactgaagtg
agtcgagtcagagagcttcaggagagactggagcaggagatcactgagctgaagaggaaa
gaccatgaactgaagcagctctcagacacagaggatcacaaccagtttctacacaactac
ccctcactgtcaccactcagtgaatctacacactcatccagcatcaggatccgtcctctg
aggacctttgaggacgtgacagcagctgtgtcccaggtcagaggtcgactacaggacatt
ctgagtgagacagagacagagattttacagattgtgtctcaagtggatgttttactgcca
caaccagagccagagaccagagctgacttcttaagatattcacagaaaatcacactggat
ccaaacacagtaaacgaagatctgttattatctgagggaaacagaaaagtaacagtaatg
agtgaagaacagtattattctaatcacccagacagattcactggttggcctcaggtcctg
agtagagagagactgactggacgttgttactgggaggtgaagatgaggagaggaggaaga
gttggtgtagcagtcacatacaagaatatcagaagagcaggaggctcagatgaatgtgga
tttggattaaataataaatcttggtcattatcttgttatggaaacagttatgacttttat
tacaacagcatcaacactccagtgtcaggtcctgtgtcctccagagtaggagtgtacctg
gatcacagtgcaggtgttctgtccttctacagcgtctctgacaccatgactctcctccac
agagtccagaccacattcactcagcctctctatgctggagttgggatttattatgatgga
gacacagctgagttctgtaaactcaaatag
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