Halorubrum sodomense: J7656_09340
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Entry
J7656_09340 CDS
T07186
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hss
Halorubrum sodomense
Brite
KEGG Orthology (KO) [BR:
hss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hss03400
]
J7656_09340
Enzymes [BR:
hss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J7656_09340
DNA repair and recombination proteins [BR:
hss03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
J7656_09340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QUO46818
UniProt:
A0A8T8LIW0
LinkDB
All DBs
Position
complement(1883211..1886102)
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AA seq
963 aa
AA seq
DB search
MSEPTPNDVQRELIESTEGPYLVDAGPGTGKTFAVTRRYGRIVDRPDVEPEDVLLATFTR
SAATEMKERIVDHSGYGLRELADAPIRTFHSHCHEILQEHGYAAPTHLGLDERITGSTRI
LEDELIEAERFREFFGGFRDDHPEHADFYRALSAPGEVLDLIEELASKGIFPTTDGWYRD
GESHLDGDFEAFQERFDAANQPRNDGRKQSELREDLSGFGRDKAYRADAPSKSTLRGGRG
TKRLDDDVARQVFYEERDGLKAFVHDVYVEYLRFALRRNYLSFSFLQLFAFVLLCEDERA
REAATFEYVIVDEFQDTSEVQFKLALLLSGTENFCVVGDWKQSIYSFQYADVDNILEFEA
RLERFAADLNADADRVPFDSPDPTRIELRENYRSTESVIDLSERAIVTPASSGDTVGTGL
DDVVALSSNAAFDNTVVEGIRHEDEHEAVLSKVQEIVGNDDYAVEGEDGEPRPPEYGDIA
VFTRTRDYGRELLDVAAEYDFPVAYDGGVELFRTDPAKLLLAWLRILESDADRGWAVVLE
RAGYAFDEIDHALETGTYPTEPTEFRDELRELESVGAVARRVLDRYGYAGDVADVLLHTL
QSVHDSTTATRGELIRHIERGVETGSTVDVRATAGDDAVTVQTIHTAKGLEYPIVVMANM
NEGRFPPRSGGSSVIGYRDPVGLRQRKIYSEEGAHPHVYDNWRHDVIRRCLPREYDEERR
LLYVAVTRAESHVVFAAGEDPNTFLEELPVAVEEIEPDVEPLDRGEPGDAELPFAVTAPD
GPIGHSPHSLMDESVFEEAGERREAGPDHESEPETRGMDFGSRVHDFAEAYALGDDETPS
NDHERRIVELLDGLSGEKHVEEPVTLPIDVDGRRVTVSGIVDLVHVTADRVEVIDYKTDA
TRRAQSEYKKQLSVYYHVLDEWFPEKAVETSLFYTSDGTREPIEPHSIEELRALVRSAEA
ESD
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagccgacgccgaacgacgtccagcgggagctcatcgagagcacggagggcccg
tacctcgtcgacgccggtcccgggacggggaagacgttcgccgtcacccgtcgctacggg
cggatcgtcgaccgacccgacgtggaaccggaggacgtgctcttagcgacgttcacgcgg
agtgccgcgacggagatgaaagagcggatcgtcgaccacagcgggtacgggctgcgggag
ctggccgacgccccgatccggacgttccactcgcactgccacgagatcctccaggaacac
gggtacgccgcgccgacgcacctcggcctcgacgagcggatcacgggctcgacgcggatc
ctcgaagacgagctgatcgaggccgagcggttccgcgagttcttcggcggcttccgcgac
gaccacccggaacacgccgacttctatcgggcgctctccgcgcccggcgaggtgctcgac
ctgatcgaggagctcgcgtcgaagggaatcttcccgacgaccgacggctggtaccgggac
ggggagtctcacctcgacggggacttcgaggcgttccaggagcggttcgacgccgcgaac
cagcctcggaacgacggtcgaaagcagtcggagctgcgcgaggacctgagcggcttcggc
cgggacaaggcgtaccgggcggacgcgccgtcgaagtcgacgctccgcggcggccgcggg
acgaagcggctcgacgacgacgtggcgcggcaggtcttctacgaggagcgcgacgggctc
aaggcgttcgttcacgacgtgtacgtcgagtacctcaggttcgcgctgcgtcgcaactac
ctatccttcagcttcctccagctgttcgcgttcgtcctcctgtgcgaggacgagcgcgcc
cgggaggcggcgacgttcgagtacgtgatagtcgacgagttccaggacacgagcgaggtc
cagttcaagctcgcgttgctgctctccggaactgaaaacttctgcgtcgtcggcgactgg
aagcagagcatctactcgttccagtacgcggacgtggacaacatcctcgagttcgaagcg
cggctggagcggttcgccgccgacctcaacgccgacgcggatcgggtccccttcgactcc
cccgacccgacccggatcgaactgcgggagaactaccggtccaccgagtccgtcatcgac
ctctccgagcgagcgatcgtgacgccggcgtcgagcggcgacacagtcgggaccggcctc
gacgacgtcgtcgccctctcctcgaacgccgccttcgacaacacggtcgtcgaggggatc
cgccacgaggacgaacacgaggccgtcctctcgaaggtccaggagatagtcggtaacgac
gactacgccgtcgagggcgaggacggcgagccgcgtccgccggagtacggggatatcgcg
gtgttcacgcgaacgcgggactacggccgcgagctcctcgacgtcgccgccgagtacgac
ttcccggtggcctacgacggcggggtcgagctgtttcggaccgacccggcgaagctgctg
ctcgcgtggctccgaatcttagagtcggacgccgaccgcggctgggccgtggtactcgaa
cgggccgggtatgcgttcgacgagatcgatcacgcccttgagacggggacgtacccgacc
gagccgacggagttccgcgacgagctccgcgaactggagtcggtcggcgcggtggcgcgc
cgcgtcctcgaccgctacgggtacgcgggcgacgtcgctgacgtcctcctccacacgctc
cagtccgtccacgactcgacgacggcgacccgcggggagctgatccggcacatcgagcgc
ggcgtcgagaccggcagcaccgtcgacgtccgcgcgaccgcgggcgacgacgcggtgacc
gttcagacgattcacacggcgaaggggctggagtacccgatcgtcgtcatggcgaacatg
aacgaggggcgcttcccgccgcggagcggcggatcgagcgtgatagggtaccgcgacccg
gtcggcctccgacagcggaagatctactcggaggagggcgctcacccgcacgtgtacgac
aactggcggcacgacgtcatcaggcgctgtctgccgcgcgagtacgacgaggagcggcgg
ctgctgtacgtcgcggtcacgcgtgcggagagccacgtcgtgttcgctgccggggaggac
ccgaacacgttcctcgaggagctcccggtcgcggtcgaggagatcgaaccggacgtcgag
ccgctcgaccgcggcgagccgggcgacgcggagctgccgttcgcggtgacggcgccggac
gggccgatcggtcactcaccgcactcgctgatggacgagtcggtgttcgaggaggccgga
gagcgtcgggaggccggcccggatcacgaatccgaacccgagacgcggggaatggacttc
ggctcgcgcgtccacgacttcgcggaagcctacgccctcggcgacgacgagacgccgtcg
aacgaccacgagcggcggatcgtcgaactgctcgacgggctgtcgggcgagaaacacgtc
gaggagccggtgacgctcccgatcgacgtcgacggccgccgggtcaccgtctcgggaatc
gtcgacctcgtccacgtgactgccgaccgggtcgaggtgatcgactacaagacggacgcg
acgcggcgcgcccagtcggagtacaaaaagcagctcagcgtctactaccacgtcctcgac
gagtggttccccgagaaggcggtcgagacgagcctgttctacacgagcgacgggacgcgc
gaaccgatcgagccgcactctatcgaggagctgcgcgcgctcgtccggtcggccgaggcg
gagtccgactga
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