Harpegnathos saltator (Jerdon's jumping ant): 105186335
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Entry
105186335 CDS
T03918
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
105186335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hst03400
]
105186335
Enzymes [BR:
hst01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
105186335
DNA repair and recombination proteins [BR:
hst03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
105186335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_A_C
BRCT_2
RNA_ligase
DNA_ligase_IV
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
105186335
NCBI-ProteinID:
XP_011144744
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MDTQIEDFMEFTHLCEFFEKVRTSRIKKEKIEILKTFFNQYRNNASKVQNTHGGNLDEIM
YPILRLILPKYYSIKDYDSRKKETKHSLTILYANVCQLSKQSDDYKALVNSRNLTSDKFE
KNDFAECAYFVFQKFLSQHSTKIALADINKFLDDISNKKMQQKIELFRLIFRRMTGFQMK
WLTRIILQDLQLGIKAEDILDVLDIKSYNTSLRNCTIYDSSKKMKQNVQLFSHFKPMLLE
RLSIDDICKLFSTSKNYYVQTKYDGERSQIHMSHGRYKYFTRNGFEITKKPLLGGIDSLG
YLSVKFAQFLDPDCTSFILDGELMVWNKKEKALLTKGMKVDVKFLQTVGPYRPCFIAFDI
IMYNDISLLDIPYHRRLKQLENLLIKAHGAISACETTPIDDRTQLEDIFRSKCLQGKEEG
IVVKRHDFLYKPNVRDGGGCYKIKAEYSDNLVQDLDLIILGGSYTKNKFPKQLNSLIMGA
AIPASSEEEHPSSFMVIVSVSNGLSKEEWNFLEERFSSKWVEECPENILTYATRTQSDMW
LRPEDSMILTIRATEMVPSNKHLIGYSFRFPRVMHIRQDKPWYSACTNKEILSLVKNKKA
IHKLIKPEANLHNNEDLLELSGCTSDKPRILTRPWSGQIAHVAFEKPVIHTRLLEGKEIC
VINGTDDFSKEDIEKVLMQHSANIVSNPISTTYCTIVGKNNTIRALDVIKNHDNVVSFDW
FLRVTSDQKSSISIHPWELLSKSKNPSDSSMEYDIYYDYYYIDATASTLQHSFARIDELD
LDAEISRDSRETLSPYTFRGLNGFFNKNMTFEKLIFRDQEGTIKENFDNSVTHVFVKTNY
IASDLKMYEDAGAKVVKSEWITECFFHDKFLNIEDYLIDLSN
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggacacacaaattgaggattttatggagttcacacacttatgcgaattttttgaaaaa
gttcgaacatccagaataaaaaaggagaaaatagaaattttgaagacatttttcaaccaa
tataggaataatgccagcaaagtgcaaaatacacatggtggcaatttggatgaaattatg
tacccaatacttagattgatattaccaaaatattactccataaaggattatgacagccgt
aaaaaggaaacgaaacattcgttgacaattctttatgccaatgtgtgtcaattatcaaaa
caaagtgatgattataaagctttagtcaattctcggaatcttacatcagataaatttgag
aaaaatgattttgctgaatgtgcttactttgtattccaaaaattcttatcccaacatagt
accaagatcgcacttgcggacataaataaattcctcgacgatattagcaataaaaagatg
caacaaaagatcgaattatttagacttatttttaggcgaatgactggattccaaatgaaa
tggttaacaagaattattcttcaggacttacagctcggcataaaagcagaagatatattg
gatgttctcgatatcaagtcgtacaataccagtttgaggaattgtacaatttatgactct
tctaagaaaatgaaacaaaatgtgcaactattctcgcattttaaaccaatgctcttggag
agattgagtattgatgacatttgtaaactgttttcgacctcgaaaaattactacgtacaa
accaagtacgatggtgagaggtctcaaattcatatgtctcatggaagatataaatatttt
acgcgtaatggatttgagataacaaagaaacctctgttgggaggaattgattcattgggt
tatctgtctgttaagtttgcacaatttctggacccagattgtacttcttttatattagac
ggagaattaatggtttggaataagaaggagaaagcgttgctcacgaaaggtatgaaggtc
gatgtgaagtttctacagacggtgggtccttatcgaccgtgtttcatcgcgttcgatata
attatgtataatgatatctcgctccttgatataccttatcataggaggctaaaacaactc
gaaaatttattaattaaagcacatggcgctataagtgcgtgtgagactactcctattgat
gataggacccaactagaagatatatttcgctctaaatgtctccaaggaaaagaagaaggc
attgttgtaaaacgtcatgatttcttgtataaaccaaatgttcgggatggcggcggttgt
tacaagattaaagcggagtattcggacaatttagtgcaagatttagatttgattatactt
ggcggttcttacacaaaaaacaagtttccaaaacaactcaatagccttataatgggtgct
gccattccagcgagtagcgaagaagagcatccgtcgtcatttatggtaatcgtgtctgtg
agcaatgggctaagcaaggaagagtggaattttctcgaagagcgattctcgtcaaaatgg
gtagaagaatgtcccgagaacattttaacctacgcaacaagaactcaatccgatatgtgg
cttcgtccagaggattccatgattttaacgatacgagcgaccgagatggtgcccagtaat
aagcatctaattggatacagttttcggtttcctagagtcatgcatatcaggcaggataaa
ccgtggtacagtgcgtgtaccaataaggaaatcttgtctttagtcaaaaacaagaaagca
atccataagttaattaagcctgaagctaatctacacaataacgaggatttgcttgaacta
tcgggatgtacatcagataagccaagaatactgacacgaccttggagcggacaaattgcg
cacgttgcgtttgaaaaaccagtaatacacacgcgactgttagaaggtaaagaaatctgt
gtgataaacggaaccgacgatttttcgaaggaggatattgaaaaggtattgatgcagcac
agcgcaaatatcgtgagcaatccaatatcaacaacttactgtacaatagtaggcaaaaat
aatacgatacgagcattggacgttataaagaaccacgataacgtagtatctttcgattgg
ttcttgcgcgttacatctgatcagaaatcatcgatttctatacatccgtgggaattgtta
agcaaatcgaagaatccttctgattcctctatggaatacgacatatattacgattattat
tatattgatgcgactgcgtcaactttgcaacattcattcgccaggatcgacgaattagac
cttgatgcagaaatctctcgagattcacgagaaacgttgtctccttatacattccggggc
ttgaatggattctttaataaaaatatgaccttcgaaaaacttatatttcgtgatcaagaa
ggtacgatcaaagaaaattttgataattccgttacacatgtatttgtgaagacgaattat
attgcgagtgatttgaaaatgtacgaggatgcaggtgcaaaagttgtcaaatctgaatgg
atcaccgaatgtttctttcatgacaaattcctcaacattgaagactatctgattgattta
agtaactaa
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