Harpegnathos saltator (Jerdon's jumping ant): 105192296
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Entry
105192296 CDS
T03918
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
hst
Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03022
Basal transcription factors
hst03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hst00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105192296
09124 Replication and repair
03420 Nucleotide excision repair
105192296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hst03021
]
105192296
03400 DNA repair and recombination proteins [BR:
hst03400
]
105192296
Transcription machinery [BR:
hst03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105192296
DNA repair and recombination proteins [BR:
hst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105192296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
105192296
NCBI-ProteinID:
XP_011154632
UniProt:
E2B8N7
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MSNATSGKNLLRPNGLQCKNLHEYLKSRPPDILNKLYHKPPICLAVFRELPIIAKHYVMR
LLFVEQPVPQAVIASWCSKLYFEEHQKVVQILNELYVWKEASIPGGLPGWILNNTFKKNL
KIVLLGGGRPWTMSNQLETDSKPRDVAFLDSYALERWECVLHYMVGSQQQEGISADAVRI
LLHAGLMKRDETDGSPIITQAGFQFLLLDTASQVWYFILQYLDTIEARGLDLIECLTFLF
QLNFSTLGKDYSTEGMSEGLLTFLQHLREFGLVYQRKRKAGRFYPTRLALNIATGETKPL
TRDTDKEGYIVVETNYRVYAYTNSNLQVALLGLFCEMIYRFPNLVVSILTRDSVRQALKS
GITATQIVGYLQQHAHSKTIEAGPPILPPTIVDQIMLWENERNRFLFSEGVLYSQFLSQT
DFEVLRDHALTTGVLIWQNERKRTIVVTKAGHDDIKKFWKRYSKGST
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatgcaacaagtggcaagaacttattacgaccaaatggactacagtgtaaaaat
ttacatgaatatttaaaatctcgtcctcccgatatattgaataaattgtatcacaaaccg
cctatttgtttggcggtgttccgcgaattacctataatcgccaagcattatgttatgaga
ttgctgtttgttgaacaaccggtgccacaagcagtcatagcttcatggtgttcaaaactg
tattttgaagaacatcagaaagtggtgcaaattttaaacgagctgtacgtatggaaagaa
gcatctataccaggtggattaccaggttggattttaaacaataccttcaagaagaacttg
aaaattgttttgttgggaggtgggagaccatggaccatgtcaaatcaattggaaactgat
agtaagccgagagatgttgctttcttggattcatatgcactagagagatgggagtgtgtt
ttacactacatggttggttctcaacagcaagaaggtatatctgcagatgctgtccgaatt
ttattgcatgctggtttgatgaagagagatgaaactgatggaagcccaattataacacaa
gctggttttcaattcttacttttagatacagcctcgcaggtatggtactttattttgcaa
tatcttgacacaattgaggcacgtggtcttgatttaatagaatgccttactttcttattt
caattaaatttttccacccttggtaaagattatagtactgaaggtatgtctgaaggtctc
ttaacatttttacaacatttgagagaatttggacttgtgtaccaacgaaaacgcaaagca
ggaaggttttatcctacacgattagcattgaatatagctactggtgaaactaaaccatta
accagagatacagataaagaaggatatatagttgtagaaacaaattatcgtgtatatgca
tatacaaattcaaatttacaagttgctttacttggattgttctgcgaaatgatatataga
tttcctaatttggttgtatctatattaaccagagattctgtaagacaagcattaaaaagt
gggataactgctactcaaatagtaggttacttacagcaacatgcgcatagcaaaacaata
gaagcaggaccacctatattaccccctactattgtagatcaaatcatgctatgggaaaat
gaaagaaacagatttttgttcagtgaaggagttttatacagtcaatttctctctcaaaca
gactttgaagttcttagagatcatgcacttacaactggagtattaatttggcaaaacgaa
aggaagagaactatagtagttaccaaagcaggtcatgatgatataaaaaagttttggaaa
cgatattcaaaaggttcaacttaa
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