Halomonas sulfidivorans: HNO53_09975
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Entry
HNO53_09975 CDS
T08036
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
hsv
Halomonas sulfidivorans
Pathway
hsv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HNO53_09975 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsv03400
]
HNO53_09975 (uvrB)
DNA repair and recombination proteins [BR:
hsv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HNO53_09975 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HNO53_09975 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF87
UB2H
Kinesin
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QTP59004
LinkDB
All DBs
Position
2135899..2137920
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFRLNANFKPAGDQPAAIEGLIRGLESGLAHQTLLGVTGSGKTFTMANVVERLQRPT
IVMAPNKTLAAQLYGEFKSFFPDNAIEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERRDALIVVSVSAIYGLGDPDQYLKMRLHFTRGELIDQRSFLRRLAELQ
YTRNDMDFKRGTYRVRGDVIDIYPADSDEEAVRVELFDDEIDSIRLFDPLTGEVRGQVPR
MTIYPKSHYVTPRETIISAADRIKAELVERLEWLRKNDRLVEAQRLEQRTLYDLEMMNEL
GYCNGIENYSRYLSGRAPGEPPPTFFDYLPDDALLFIDESHVSVPQVGGMYKGDRSRKET
LVEYGFRLPSALDNRPMTFEEWESICPQTIFVSATPGPYEAEHAGQVVEQVVRPTGLVDP
EIEVRPASTQVDDLLSEIRLRTEVGERVLVTTLTKRMAEDLTEYLDEHDVRVRYLHSDID
TVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRNERSLIQTIGR
AARNAHGKAILYADRVTDSMRRAIDETERRRAKQIAHNEKHGITPTTVTRSVADIMEAAQ
APGRKGKGRRSERKVAEGAAIYDISELSPTDLVKEVSRVEDAMFEAAQNLEFEDAARLRD
RLHELKERQLALG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagccgtttcgcctcaatgccaacttcaagcccgccggggaccagcctgccgcc
atagaaggcctgatccgggggctcgagtccgggctggcccatcagacgctgctcggcgtg
accgggtctggcaagaccttcaccatggccaacgtggtggagcggctgcagcggcccacc
atcgtcatggcgcccaacaagaccctggccgcccagctctacggcgagttcaagtcgttc
tttcccgataatgccatcgagtacttcgtctcctactacgactactaccagccggaagcc
tacgttccctcgtcggataccttcatcgagaaggacgcttcgatcaacgaccacatcgag
cagatgcgactctcggcgaccaaggcattgctcgaacgtcgcgatgcgctgatcgtggtc
tcggtctcggccatctacggtctcggcgaccccgaccagtacctcaagatgcgcttgcac
ttcacccgcggcgaactgatcgaccagcgctcgttcctgcgccgcctggcggagctgcag
tacacccgtaacgacatggacttcaagcgcggcacctaccgggtgcgcggcgacgtgatc
gacatctacccggccgattccgacgaggaggcggtgcgggtcgagctgttcgatgacgag
atcgactcgatccggctgttcgatccgctcaccggcgaggtgcgcggccaggtgccgcgc
atgaccatctaccccaagagccactacgtgacgccgcgtgagacgatcatctcggccgcc
gatcggatcaaggccgaactggtcgaacgcctggagtggctgcgcaagaacgaccgcctg
gtggaggcccagcggctggaacaacgcacgctttacgacctcgagatgatgaacgagctg
ggctactgcaacggtatcgaaaactactcacgctatctctcggggcgtgcgccgggcgag
ccgccgcccaccttcttcgactacctgccggacgatgcgctgctgttcatcgacgaatcc
cacgtcagcgttccccaggtcggcggtatgtacaagggcgaccgctcgcgcaaggagaca
ctcgtcgagtacggctttcgcctgccgtcggcgctggacaaccgtccgatgaccttcgag
gagtgggaaagcatctgcccgcagacgatcttcgtctcggccactccggggccctacgag
gctgagcacgccggccaggtggtggagcaggtggtgcgtcccaccggtctggtcgacccc
gaaatcgaggtgcgtccggcctcgacccaggtcgacgacctgctttccgagattcgactg
cgtaccgaagtgggcgagcgggtgctggtcaccaccctgaccaagcgcatggcggaggat
ctcaccgaatacctcgacgaacatgacgtgcgggtgcgctacctgcactcggacattgac
accgtggagcgggtggagatcatccgcgacctgcgcctgggcaagttcgacgtgctggtg
ggcatcaacctgctgcgagaagggctcgacattcccgaggtctcgctggtggcgatcctc
gatgccgacaaggagggcttcctgcgcaacgagcgctcgctgatccagaccatcggccgg
gcggcacgcaatgcccacggcaaggcgatcctctacgccgaccgcgtgaccgactccatg
cgccgcgccatcgacgagaccgagcggcgccgcgccaagcagatcgcccacaatgagaaa
cacggcatcacgccgaccaccgtgacccgctcggtggccgacatcatggaagcggcccag
gccccggggcgcaagggcaaagggcggcgcagcgagcgcaaggtagccgaaggcgcagcg
atctacgatatctccgagctctcgccgaccgacctggtcaaggaggtctcgcgagtcgag
gatgccatgttcgaggcggcccagaacctggagtttgaggatgcggccaggctgcgcgac
cggctgcatgagctaaaggagcggcagttggcgcttggatag
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integrated database retrieval system
