Billgrantia sulfidoxydans: HNO51_02255
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Entry
HNO51_02255 CDS
T08035
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hsx
Billgrantia sulfidoxydans
Pathway
hsx03410
Base excision repair
hsx03430
Mismatch repair
hsx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HNO51_02255
03430 Mismatch repair
HNO51_02255
03440 Homologous recombination
HNO51_02255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsx03400
]
HNO51_02255
DNA repair and recombination proteins [BR:
hsx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HNO51_02255
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HNO51_02255
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HNO51_02255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QTP53601
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All DBs
Position
474727..476532
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AA seq
601 aa
AA seq
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MDVTAPPDLHARLKPRLLPRPRNEALYARARAEGLSELQARVLAGRLADYEGELAPLTQP
SLRYLEHPERLADGRRAAERIATAVAEGEHIGILTDYDVDGITSHVVIRRTLVELFGVPE
SRLHSLIGHRIHDGYGISLPLVERTLGLSPRPTLVITADCGSSDEPRIARLKAEGIDVVV
SDHHALPIEGPPPSAHAVVNPTRSDCRYPDRTIAGCMVAWLVMSLTRSVLIEWGVIPEAT
PKLSAWLSYVALGTVADCVSLGASPANRAVVSHGLALINRMEAACWRAMATRLGEDSVPF
SAETLAFQMGPRINARSRLDDPYAALHFMLAADDATAIRHLQTLDEDNQSRKVIEAEMVE
EARTLALPQIEADLPALVVYLESGHPGVQGIVASRLVQAFGRPALVLTPAAAPGMLTGSG
RSIEALHLRDALQRAHELAPEALPRFGGHRGAAGVGVPVERFEAFRVAFLQAVGEQLVGL
ELFPQVFTDGTLMPEQFRLSTLLELEALGPYGREFDAPLFEGEFLVESLRSVGADGTHLS
MTLSAGAASLKAIWFRALTPGELPAFGLGDRLRCAYRLNRNRWRGQESLQLMIEHAEPRR
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
ttggacgtgaccgcgccgcccgacctgcacgcccgactcaagccgcggctattgccgcgt
ccgcgcaacgaggcactctacgcccgcgcccgcgccgaggggctgagcgagctgcaggcc
cgcgtgctggccggccgcctggccgactacgaaggcgaactggcaccgctgacccagccc
agcctgcgctacctcgaacacccggagcgcctggccgacggccgccgcgccgccgagcgc
atcgccaccgccgtggccgagggcgagcacatcggcatcctcaccgactacgacgtcgat
ggcatcacctcccacgtggtgatccggcgcaccctggtggaactcttcggcgtgccggag
tcgcgcctgcacagcctgatcggtcaccgcatccacgacggctacggcatcagcctgccg
ctggtggagcgcacgctcgggctctcgccgcggccgacgctggtgatcaccgccgactgc
ggcagctccgacgaaccgcgcatcgcccggctcaaggcggaaggcatcgacgtggtggtg
agcgaccatcacgccttgcctatcgagggacctccgccctcggcccatgccgtggtcaat
cccacgcgcagcgactgccggtatcccgaccgtactatcgccggctgcatggtcgcctgg
ctggtcatgtcgctcacgcgcagcgtactgatcgaatggggcgtgatccccgaggcgacg
cccaagctctccgcctggctctcctacgtggcgctgggcaccgtggccgactgcgtgtcg
ctgggggcgagcccggccaatcgcgcggtggtcagccacggcctggcgctgatcaaccgc
atggaggcggcctgctggcgcgccatggccacgcgcctgggcgaggacagcgtgccgttt
tccgccgagacgctggccttccagatggggccgcgcatcaacgcccgttcccgcctcgac
gacccctacgcggcattgcacttcatgctggcggcggacgatgccaccgcgatacgccat
ttgcagacgctggacgaggacaaccagtcgcgcaaggtgatcgaagcggagatggtcgag
gaggcgcgcaccctggccctgccccagatcgaggccgatcttccggcgctggtggtctac
ctcgaaagcggacatcccggcgtgcagggcatcgtcgcctcgcggctggtgcaggccttc
ggacgccccgcgctggtgctgacgccggccgcggcgcccggcatgctcaccggctcgggg
cgctccatcgaggcgctgcacctgcgcgacgccttgcagcgcgcccatgagctggcgccc
gaggcgctgccgcgcttcggtggccatcgcggggcggccggggtcggcgtgccggtggag
cggttcgaggctttccgtgtcgcctttctgcaggccgtaggcgagcagctggtcgggctc
gagctgtttccccaagtgttcaccgacgggacgctcatgcccgagcagttccggctgtcc
acgctgctcgagctggaggcgctgggcccctacgggcgcgagttcgacgcgccgctgttc
gaaggggagttcctggtggagtcgctgcgttcggtgggggccgatggcactcatctgtcg
atgacgctgtcggccggtgcggcgagtctcaaggcgatctggtttcgtgccctcacgccg
ggagaattgcccgcctttggtctgggtgacaggctgcgctgcgcctatcggctcaaccgc
aaccgctggcgggggcaggagtcgctgcagctgatgatcgaacatgccgagccgcgtcgc
ggttga
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