KEGG   Billgrantia sulfidoxydans: HNO51_03850
Entry
HNO51_03850       CDS       T08035                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hsx  Billgrantia sulfidoxydans
Brite
KEGG Orthology (KO) [BR:hsx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsx03400]
    HNO51_03850
Enzymes [BR:hsx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HNO51_03850
    5.6.2.6  RNA 3'-5' helicase
     HNO51_03850
DNA repair and recombination proteins [BR:hsx03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HNO51_03850
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII Lhr_WH SLS1_N PhoH
Other DBs
NCBI-ProteinID: QTP53892
LinkDB
Position
799934..804271
AA seq 1445 aa
MPLDVFHPAVSQWFTRALGVPTEVQARAWPAIGDGGHVLIAAPTGSGKTLAAFLAAIDGL
VRRGLDSELPDETVVLYVSPLRALSNDIQRNLQAPIRGIAEGLSAEGREAPEIRAWVRTG
DTTSSERARMRKRPPHIVVTTPESLYVLLTSDSGRRMLSSVRTVIVDEIHAVAGTKRGSH
LALSLERLAGLTARPPQRIGLSATQKPVEAVAAFLTGGSECTIVDTGHVRRRDLAIEVSG
SPLTAVMANEVWEEVYDRLAALVREHRTTLIFANTRRVCERVARHLADRLGDEWVTSHHG
SLAREHRLDAEQRLKQGTLRALVATASLELGIDIGEVDLVCQLGSPRSMSAFLQRVGRSG
HGVGRVPKGRLFPLTRDDLVECTALMGAVQAGELDRLHIPEGPLDVLAQQIVAEVAGAGE
TEESELLARIRSAWPYRTLSEERFDAVVQMLADGYTTRRGRRGAYLHRDRVNGRLRPRRN
ARLVALTNGGAIPDHFDYDVILQPEEIRVGTVNEDFAFESMPGDIFQLGNQAYRILKLAT
GKLYVEDARGAPPSIPFWFGEAPARTEELSQAVSRLREGIDRQLAEGDEAEAQAWLEAEY
GLTPDAAEQLVRYLAVARAALGVIPSQRHLVLERFFDEAGDMHLVLHSPFGSKLNRAWGL
ALRKRFCRKFNFELQAAALEDSIVLSLGPTHSFPLDEVWSYLNARTVREVLIQALLDAPM
FGLRWRWNASVGLAVPRTRNGKRRPPQLQRQDSEDLLSVVFPDQLACAENLAGARELPDH
PLVDQTLHDCLTEAMDIDGLERLLARLEAGEIAVSGRDLAVPSPLSEEVVNARPYAFLDD
GAQEERRTLSVRTGGALDVAEAAASARYAPEVVARVREEAWPAPRDADELHDALVVSGFI
AGREAAEEWRPWFDTLARDRRAAVVAPPDGEPLWTAAERLGELLALHPGASVEPPIEAAG
EAPETPDEALTELLRSRLETLGPVTAASLSTPLAISLERTMAALARLEVEGFVLQGNFLG
GSEVAWCERRLLARLHRYAIDRRRAEIEPVSIQHYLRFLLDWHGLTEPPQGPEALAAAVE
RLEGFPVAAGAWESDVLPARVADFSPHMLDQLLASGRFIWLRLLPPRIAEGDERQRPGPL
RNTPVALIDRQALHDWRQAVPAPELEELPLSGGARRVLEALQGGGAMFFADLLGPAHMLR
TQVEEALGELASWGLVTSDSFTGLRALIAPASKRPPIAAGGRRRRRYAPGVDAAGRWSWL
PAPERESPIGKRRITTDMESLEHIAWVLLERYGVVFRRVIEREPALPPWRELLYVYRRLE
ARGEIRGGRFVQQFAGEQFALAEAVGGLKAMRRREPDGTRVVVAAADPLNLVGILTPGTR
LPAVSGNRLLYRDGVPEAVLQNGEVHFFETLPSEAKWQVQQLLRRGPGHEKPPTPEVPGA
AISMR
NT seq 4338 nt   +upstreamnt  +downstreamnt
atgccgctcgacgtcttccatcccgctgtcagccagtggttcacacgcgccctcggtgtg
cccaccgaggtccaggcgcgcgcctggccagccatcggcgatggcggccatgtgctgatc
gccgcccccaccggctcgggcaagacgctggcggcgttcctcgccgccatcgatggcctg
gtgcgccgtgggctcgacagtgagctgcccgacgaaaccgtggtgctctacgtctcgccg
ctgcgcgcgctctccaacgacatccagcgcaacctgcaggcgccgattcgcggcatcgcc
gaggggctttcggccgaaggccgggaggcgccggagatacgcgcctgggtgcgcaccggg
gataccacctcgtcggagcgcgcgcgcatgcgcaagcgtccgccgcatatcgtggtcact
acgccggagtccctctacgtgctgctcacgtcagactcggggcggcggatgctctccagc
gtgcgcacggtaatcgtcgacgagattcatgcggtggccggcaccaagcgcggctcgcac
ctggcgctgtcgctggagcggctggccgggctcaccgcgcgcccgccgcagcgcatcggg
ctctcggcgacgcagaagccggtcgaggcggtggccgcgttccttaccggcggcagtgag
tgcaccatcgtcgacaccggccacgtgcgccggcgcgacctggccatcgaagtatccggc
tcgccgctcactgcggtgatggccaacgaggtgtgggaagaggtctacgaccgcctggca
gcgctggtgagagaacatcgcaccacgctgatcttcgccaacacccggcgggtctgcgag
cgtgtggcgcgccacctggccgaccggctgggggatgagtgggtgacctcgcatcacggc
agcctggcccgcgaacaccgcctggacgccgaacagcgcctcaagcagggcacgctgcgt
gcgctggtggccaccgcctcgctggaactgggcatcgacatcggcgaggtggatctggtc
tgccagctcggctcgccgcgctcgatgtcggccttcctgcagcgggtgggtcgctccggc
catggggtggggcgcgtgcccaaggggcggctgttcccactgacccgcgacgatctggtg
gagtgcacggcgctgatgggcgcggtgcaggccggcgagctcgatcggctgcacattccc
gaggggccgctcgacgtgctggcccagcagatcgtcgccgaggtcgccggggcgggggaa
accgaggagagcgagctgttagcacgcatccgctctgcctggccctaccgtaccctgagc
gaggagcgcttcgacgcggtggtgcagatgctcgccgacggctacaccacccggcgcggg
cggcgcggggcctacctgcatcgcgaccgcgtcaacggccgcctgcgcccgcggcgcaat
gcgcggctcgtcgccctgaccaacggcggggcgatccccgaccacttcgactacgacgtg
atcctgcagcccgaggagattcgcgtcggcaccgtcaacgaggattttgccttcgagagc
atgccgggcgatatcttccagctcggcaaccaggcctatcgcatcctcaagctcgccacc
ggcaagctctacgtcgaggacgcccgcggcgcaccgcccagcatcccgttctggttcggc
gaggcgccggcgcgtacggaagagctctcgcaggcggtgtcgcggctgcgcgaggggatc
gaccggcaactggccgaaggcgacgaggccgaggcccaagcgtggctggaagccgaatac
ggcctcacgcccgatgccgccgagcagttggtgcgctacctggccgtggcgcgggcggca
ctcggtgtgattcccagccagcgccacctggtgctggaacgcttcttcgacgaggccggc
gacatgcacctggtgctgcactcgccgttcggctccaagctcaaccgcgcctggggcctg
gcgctgcgcaagcgcttctgccgcaagttcaacttcgagctgcaggcggcagcgctggag
gacagcatcgtgctgtcgctggggccgacccacagcttcccgcttgacgaggtgtggagc
tatctcaacgccaggacggtgcgcgaggtgctgatccaggcgctgctcgatgcgccgatg
ttcggcctgcgctggcgctggaacgcctcggtggggctcgccgtgccgcgtacccgcaac
ggtaagcggcgcccgccgcagctgcagcgccaggactccgaggacctgctctcggtggtg
tttcccgaccagctcgcctgcgccgagaacctggcgggggcgcgggagctgcccgatcat
ccgctggtcgaccagaccctgcacgactgtctgaccgaggccatggacatcgacggcctc
gagcgcctgttggcgcgcctcgaagccggcgagatcgccgtcagcgggcgcgacctggcg
gtgccctcgccgctgtcggaagaggtggtcaacgcgcgcccctacgccttcctcgacgac
ggcgcccaggaggagcggcgcaccctcagcgtgcgcaccggcggcgcgctcgacgtggcc
gaggctgccgcctcggcgcgctacgctcccgaggtggtcgcccgggtgcgcgaggaggcc
tggcccgccccccgcgatgccgacgagctgcacgacgcgctggtcgtgagcggcttcatc
gccgggcgcgaagccgcagaggagtggcggccgtggttcgacacgctcgcccgggacagg
cgtgccgcggtcgtcgcgccacccgacggcgagccgctgtggacggcagcggaacgcctc
ggcgagctgctggcgctccatcccggtgccagcgtcgagccgcccatcgaggcggcgggc
gaggcgccggaaacccccgacgaggcactgaccgagctgctgcgctcgcggctcgagacg
ctggggccggtcaccgcggccagtctctccacgccgctcgccatttcgctcgaacgcacc
atggcggcgctggcacgtctggaggtcgaaggcttcgtgctgcagggaaatttcctaggt
ggcagcgaggtggcctggtgcgagcggcgcctgctggcgcgcctgcatcgctatgccatc
gaccgccgtcgcgccgagatcgagccggtgagcatccagcactacctgcgtttcctgctc
gactggcacggcctgaccgagcccccgcaggggccggaggcgctggccgcggcggtggag
cggctggagggctttcccgtggcggcaggcgcctgggagagcgacgtgctgccggcgcgg
gtggccgatttctcgccgcacatgctcgaccagctgctcgccagcggacgcttcatctgg
ctgcgcctgctgccacccagaatcgccgagggtgacgaacgccagcgtcccggtccgctg
cgcaacacgccggtcgcgctcatcgatcgccaggcattgcacgactggcgtcaggcggtg
ccggcccccgagctggaggaacttccgctctccggcggggcccgccgggtgctcgaggcg
ctgcagggcggcggggccatgttcttcgccgacctgctcggccccgcccacatgctgcgc
acccaggtggaggaggcgctgggcgagctggcctcctgggggctggtcacctccgacagt
ttcaccggcctgcgggcgctgatcgccccggccagcaagcgtccgcccatcgccgcgggc
gggcgtcggcgcaggcgctatgcgccgggagtggacgccgccgggcgctggtcgtggctg
ccggcacccgagcgtgagtcgcccatcgggaagcgtcgcatcactaccgacatggagagc
ctggagcatatcgcctgggtgctgctggagcgctacggcgtggtgtttcgccgtgtgatc
gagcgtgagccggcattgccgccctggcgcgagctgctgtatgtctaccgccgcctggag
gcgcgcggcgagatccgcggcgggcggttcgtgcagcagtttgccggtgagcagttcgcc
ctggccgaggcggtgggagggctcaaggccatgcgccgccgggagccggacggcacccgc
gtggtggtggctgccgccgacccgctcaacctggtgggcattctcacgcccggcacgcgg
ttgccggcggtgtcgggcaatcgcctgctctatcgcgacggtgtgccggaggcagtgctg
cagaatggcgaagtgcactttttcgagacgctgccctccgaggcgaagtggcaggtgcag
cagctgctgcggcgcgggccggggcatgaaaaacccccgacaccagaggtgccgggggct
gcgatatcgatgcggtga

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