Billgrantia sulfidoxydans: HNO51_08940
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Entry
HNO51_08940 CDS
T08035
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
hsx
Billgrantia sulfidoxydans
Brite
KEGG Orthology (KO) [BR:
hsx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsx03000
]
HNO51_08940
Transcription factors [BR:
hsx03000
]
Prokaryotic type
Helix-turn-helix
Other families
HNO51_08940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
IclR
HTH_30
AAA_2
HTH_AsnC-type
HTH_Tnp_ISL3
HTH_50
HTH_23
HTH_29
MCM
AAA
HTH_28
AAA_16
HTH_24
HTH_1
Mg_chelatase
HTH_22
Zeta_toxin
HTH_20
AAA_22
HTH_7
TrmB
HTH_IclR
HTH_38
TetR_N
LZ_Tnp_IS481
HTH_17
AAA_3
HTH_11
CLIP_SPH_mas
Motif
Other DBs
NCBI-ProteinID:
QTP54795
LinkDB
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Position
complement(1923779..1925770)
Genome browser
AA seq
663 aa
AA seq
DB search
MSTTQHQRQHIDTILRTVADTEARTPAQNEAGIIARSWRRCIDRYGLDPARPTPARYVPG
ATLREHQDQADALLQVARAGVEQLYRQVAPLSYVVLLTDARGIAVQFLGAKSDQREHQRT
GLYLGSDWSESHAGTCAVGTCIHERTALTCHHSDHFSAHHIQLTCTAAPVFDPHGQLLAV
LDISAYRSPSAKESQTFALQLVKTTARMIEDAYFLQRYGDRHIVCLDRSREFVQINRRYL
LAMEEDGTLVAANTAGRKLLRHHGLPLPEAGEARPFQAWNIRDLLDGEVSEVLAIPQHSD
DRVQAFHTRRHREIHFATLIEPPRRPGANRSLPRDSSLAPLEALAEDDPSMRDTLTRAAR
LRNEPINILVMGETGTGKERMARALHDSSRRRDKPFVAINCAAMPESLIESELFGHEPGS
FTGARSKGMKGLIVQADGGTLFLDEIGDMPLQLQTRLLRVLAEQEVLPIGASRPIKVDLR
VVAATHRDLRELIQAGRFREDLFYRLNGASLRLPPLRERADKGYLIRQIFAELNEQRGSR
VRLRGDAMSALLAYPWPGNIRELHNALHYALATCDGGEVVVGDLPEECVHGQLAHPGASQ
GQALSTATGSSARPLHQDLLYRALCRHQWNVSAVARELGLSRPTIYRRMKRLGIVPPNQQ
PAS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgacacaacaccagcgccagcatatcgacacgatattgcgcaccgttgccgac
accgaggcgagaacgccggcgcaaaacgaagccggcatcattgcccgctcatggcgtcgc
tgcatcgatcgctatggcctcgatccggcccgtcccacgcccgcccgctacgtgcccggc
gccaccttgcgcgaacaccaggaccaggccgatgccctgctccaggtggcccgggccgga
gtcgagcagctctatcgccaggtcgcgccgctgagctacgtggtgctgctgaccgatgcc
cgcggcatcgcggtgcagtttctcggcgccaagagcgaccagcgcgagcaccagcgcacc
ggcctctacctgggatcggactggagcgaatcccacgccggaacctgcgccgtgggcacc
tgcatccacgagcgcaccgccctgacctgccatcacagcgaccacttcagcgcccaccac
atccagctcacctgcaccgcggcaccggtcttcgatccccacggccagctgctggcggta
ctcgacatctccgcctatcgctcgccctccgccaaggagtcgcagaccttcgccctgcag
ttggtcaagaccaccgccaggatgatcgaggacgcctacttcctgcagcgctacggcgac
cgccatatcgtctgcctggatcgctcgcgggagttcgtgcagatcaatcgccgctacctg
ctggccatggaggaggacggcaccctggtggccgccaacacggcggggcgcaagctgctg
cgccatcacggcctgccgctgcccgaggccggcgaggcacgccccttccaggcctggaac
attcgcgacctgctcgacggcgaagtcagcgaggtactcgccatcccccagcacagcgac
gaccgggtacaagcctttcacacccggcgccaccgcgagatccacttcgccaccctgatc
gagccgccccggcgccccggcgccaatcgctcgctgccccgcgactccagcctggccccg
ctcgaggcgctggccgaggacgacccgagcatgcgcgacaccctgacccgggccgcgcgc
ctgcgcaacgagccgatcaacatcctggtgatgggcgagaccggtaccggcaaggagcgc
atggcccgcgccctgcacgactcgagccggcgccgcgacaagccattcgtggcgatcaac
tgcgccgccatgccggaatcgctgatcgagagcgagctgttcggccacgaaccgggcagc
ttcaccggggcgcgcagcaagggaatgaaggggctgatcgtgcaggccgacggcggcacg
ctgttcctcgacgagatcggcgacatgccgctgcagttgcagacccgtctgctgcgggtg
ctggccgagcaggaggtattgcccatcggcgccagccggccgatcaaggtggacctgagg
gtagtggccgccacccaccgcgacctgcgcgagctgatccaggccgggcgcttccgcgag
gacctcttctatcgtctcaacggcgccagcctgcgcctgccgccgctgcgcgaacgcgcc
gacaagggctacctgatccggcagatcttcgccgagctgaacgagcagcgcggttcgcgg
gtgcgcctgcgcggcgacgccatgagcgccctgctcgcctatccctggcctggcaacatt
cgcgagctgcacaacgcgctgcactacgcgctggccacctgcgatgggggcgaggtcgtc
gtcggcgacctgcccgaggagtgcgtgcatggtcagttggcccaccccggtgccagccag
ggccaggccctgtccaccgccaccggttcatccgcgcgaccgctccatcaggacctgctc
taccgcgccctgtgccgacaccaatggaacgtcagcgccgtggcccgggaactggggcta
tcacgcccgaccatctaccgccgcatgaagcggctgggcatcgtgccgccgaaccagcag
cccgccagctga
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