Billgrantia sulfidoxydans: HNO51_10860
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Entry
HNO51_10860 CDS
T08035
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
hsx
Billgrantia sulfidoxydans
Pathway
hsx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HNO51_10860 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsx03400
]
HNO51_10860 (uvrB)
DNA repair and recombination proteins [BR:
hsx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HNO51_10860 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HNO51_10860 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF87
UB2H
Kinesin
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QTP55140
LinkDB
All DBs
Position
complement(2334940..2336961)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFRLNANFKPAGDQPTAIEGLIHGLESGLAHQTLLGVTGSGKTFTMANVVERLQRPT
IVMAPNKTLAAQLYGEFKSFFPDNAIEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERRDALIVVSVSAIYGLGDPDQYLKMRLHFTRGELIDQRRFLRRLAELQ
YTRNDMDFKRGTYRVRGDVIDIYPADSDEEAVRVELFDDEIDSIRLFDPLTGEVRGQVPR
MTIYPKSHYVTPRETIISAADAIKAELVERLAWLRKNDRLVEAQRLEQRTLYDLEMMNEL
GYCNGIENYSRYLSGRNPGEPPPTFFDYLPDDALLFIDESHVSVPQVGGMYKGDRSRKET
LVEYGFRLPSALDNRPMTFEEWERICPQTIFVSATPGPYEAEHAGQVVEQVVRPTGLVDP
EIEVRPASTQVDDLLSEIRARAEVGERVLVTTLTKRMAEDLTEYLDEHDVRVRYLHSDID
TVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRNERSLIQTIGR
AARNAHGKAILYADRVTDSMRRAIDETERRRAKQIAHNEKHGITPTTVTRSVADIMEAAQ
APGRKGKGRRGERKVAEGAAIYDISELSPTDLVKEVSRVEDAMFEAAQNLEFEEAARLRD
RLHELKERQLALG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagccgtttcgcctcaatgccaacttcaagcccgccggcgatcagcctaccgcc
atcgagggcctgatccacgggctcgagtccgggttggcccaccagacgctgctcggcgtg
accgggtcgggcaagaccttcaccatggccaacgtggtcgagcggctgcagcggccgacc
atcgtcatggcgcccaacaagaccctggccgcccagctctacggcgagttcaagtcgttc
tttcccgacaacgccatcgagtacttcgtctcctactacgactactaccagccggaagcc
tacgttccctcgtcggataccttcatcgagaaggatgcctcgatcaacgaccacatcgag
cagatgcggctctcggcgacgaaagcgctgttggaaaggcgcgatgcgctgatcgtggtg
tcggtctcggcgatctacggtctcggcgaccccgaccagtacctcaagatgcgcctgcac
ttcacccgcggcgagctgatcgatcagcgccgcttcctgcgccgcctggcggagctgcag
tacacccgcaacgacatggacttcaagcgtggtacctaccgggtgcgcggcgacgtgatc
gacatctacccggccgattccgacgaggaagcggttcgggtcgagctgttcgacgacgag
atcgactcgatccggctgttcgacccgcttaccggcgaggtgcgcggccaggtaccgcgc
atgaccatctaccccaagagccactacgtgacgccgcgggagaccatcatctcggctgcc
gatgcgatcaaggccgagctggtcgaacgcctggcgtggctgcgcaagaacgatcgcctg
gtcgaggcccagcggctggagcagcgtactctctacgatctcgagatgatgaacgagctg
ggctactgcaacggcatcgagaactactcgcgctatctttcgggccgcaaccccggcgag
ccgccgcccaccttcttcgactacctgcccgacgatgcgctgctgttcatcgacgagtcc
cacgtcagcgttccccaggtcggcggcatgtacaagggcgaccgctcgcgcaaggagacg
ctggtcgagtacggcttccgcctgccctcggcgctggacaaccgccccatgaccttcgag
gagtgggagcgcatctgcccgcagacgatcttcgtctcggccaccccggggccctacgag
gccgagcacgccggccaagtggtggagcaggtggtgcgccccaccgggctggtcgatccc
gagatcgaggtgcgtccggcctcgacccaggtcgacgacctgctctccgagatccgtgcc
cgcgccgaggtgggcgagcgggtgctggtcaccaccctgaccaagcgcatggcggaggac
ctcaccgagtacctcgacgaacatgacgtgagggtgcgctacctgcactcggacatcgac
acggtggagcgggtggagatcatccgcgacctgcgcctgggcaagttcgatgtgctggtg
ggcatcaacctgctgcgcgagggcctcgacatccccgaggtctcgctggtggcgatcctc
gatgccgacaaggagggcttcctgcgcaacgagcgctcgctgatccagaccatcggccgg
gcggcgcgcaacgcccacggcaaggcgatcctctacgccgaccgggtgaccgactccatg
cgccgcgccatcgacgagaccgagcggcgccgcgccaagcagatcgcccacaacgagaag
cacggcatcacgcccaccaccgtgacccgctcggtggccgacatcatggaggcggcccag
gccccgggtcgcaagggcaaggggcgccgcggcgagcgcaaggtggccgagggtgcggcg
atctacgatatctccgagctctcgccgacggacctggtcaaagaggtctcgcgagtcgag
gacgccatgttcgaggcggcccagaacctggagttcgaggaggcggccaggctgcgcgac
cggctgcatgagctcaaggagcggcaactggcgcttgggtag
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