Hibiscus syriacus (Rose-of-Sharon): 120122291
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Entry
120122291 CDS
T09559
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120122291
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsyr02000
]
120122291
04147 Exosome [BR:
hsyr04147
]
120122291
04090 CD molecules [BR:
hsyr04090
]
120122291
Enzymes [BR:
hsyr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120122291
Transporters [BR:
hsyr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120122291
Exosome [BR:
hsyr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120122291
CD molecules [BR:
hsyr04090
]
Proteins
120122291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
Zeta_toxin
AAA_21
AAA_16
ABC_ATPase
AAA_30
RsgA_GTPase
AAA_22
DUF87
AAA_15
DLIC
G-alpha
nSTAND1
Motif
Other DBs
NCBI-GeneID:
120122291
NCBI-ProteinID:
XP_038997379
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MAAKDGMFQCADRIDKLLMFFGTLGSIGDGLQYPLTMLVLSKVINDYGDPNFNLSNDTVD
EYAVRLLYVAIVVGVSAFVEGVCWTRTAERQTSRIRTEYLKSVLRQDVAFFDTQETGAST
TFQVVSTISADANAIQVAICDKIPNCLMFLSTMFFCLIVSFILSWRLTLAAIPLTLFFII
PGLLFGKMMMDVIMKMIESYGVAGGIAEQAISSIRTVYSYVAENQTIEKFSQALEKTLEL
GIKQGFAKGLLMGSMGSIYLGWAFQAWIGTYLVTEKGEKGGSIFVAGINVIMGGLSVLGA
LPNLTGITEATVAATRIFEMINRTPSIDADDRKGKALSYVRGEIEFKDIHFAYPSRSDSP
VLQDLNLRIPAGKSVGLVGGSGSGKSTTIALLQRFYDPTEGEVLLDGYKISRLQLKWLRS
QMGLVSQEPVLFATSIKENILFGKEGASMEDVINAAKAANAHDFIVKLPEGYETHVGQFG
FQMSGGQKQRIAIARALIRDPKILLLDEATSALDAQAERIVQEAIDKASVGRTTIIIAHR
LLTIRNANLIVVLQGGRVIESGSHDELMQTNGREGGEYYQMVQLQKMALQSEASDDSDYK
TEGRKRHRLQVAQSPMSYRSSVPSTPALSPFSPGLSVGTPYSYTIQFDPDDGSDNEDFNQ
VAHPTPSQWRLLEMNAPEWGRALIGSMAAIGSGAVQPINAYCVGLLISIYFRTDKSEIKS
RSRTLSFVFLGIAALNFTSSLLQHYNFAVMGEKLTKRVREKFLEKLMTFEIGWFDEEENT
SAAICTRLATEANMVRSLVGDRMSLLVQAIFGSIFAYVLAIILSWRLSIVMIAVQPLVVG
SFYARSILMKSMSGKAQKAQKEGSQLASEAVVNHRTITAFSSQKRILGLFKETLKGPKKE
SVRHSWLSGLGLFSSQFFNTASTALAYWYGGRLLTQELISSEHLFQAFLVLLFTAYVIAE
AGSMTNDLSKGNSAVRSVFAILDRKSEIDPDYTWGLEIKKSIKGRIELKNVFFAYPTRSD
QMIFKGLNLRIEAGRTVALVGQSGSGKSTIIGLIERFYDPTKGSVFIDAQDIKNYNVRML
RTHIALVSQEPTLFAGTIRENIAYGKTNAKESEIRKAAKLANAHEFISGMKDGYDTNCGE
RGVQLSGGQKQRIALARAILKNPSILLLDEATSALDSVSENLVQEALEKMMVNRTCVVVA
HRLSTIQKADYIAVIKNGKVVEHGSHNELVSLGRGGAYYSLIKLQGGGTSPYRQT
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaagatggcatgtttcaatgcgccgaccgcatcgacaagctgttgatgttc
ttcggaactttgggtagtattggagatggattgcagtaccctcttacaatgcttgttctt
agcaaagtgatcaatgattatggagatcccaatttcaacttgtctaatgatactgtggat
gagtatgcagttaggctgctctatgttgcgatcgttgttggagtttccgcctttgttgaa
ggggtttgttggacacgaaccgcagagaggcagacttcccgaataaggaccgaatacttg
aaatcggtcctcagacaggatgttgctttctttgacactcaggaaaccggagcctccaca
acgttccaagtcgtgtcgacgatatcagctgatgccaatgcaatccaagttgcaatatgt
gacaagatcccgaattgcctcatgtttctctcgaccatgttcttctgcctcattgtctcc
ttcatactgtcatggagacttaccttagccgcgatccctttgacactgttcttcatcatt
cctggactgttattcgggaaaatgatgatggatgtgataatgaagatgattgaatcttat
ggtgttgctggtgggattgcagagcaagcaatttcctccataagaactgtatattcatat
gtagctgagaatcaaacaattgagaagttcagccaagcacttgaaaagactttggaattg
ggaataaagcaaggctttgcaaagggcttgttgatgggaagcatgggaagcatttattta
ggatgggcgtttcaggcatggattgggacttatttggtcaccgagaaaggcgaaaaaggc
ggttcgatttttgtagccggaatcaatgtcataatgggaggattgagtgtgttaggtgca
ttaccaaatttaactggcatcactgaggcaaccgttgctgctactaggattttcgagatg
attaaccggactccttcaattgatgcagatgataggaaaggaaaggctttgtcatatgta
agaggagagattgaatttaaggacatacattttgcctatccgtctaggtctgattcacct
gtcttgcaagatttgaatcttagaattccagccggtaagtctgtcggtctcgtcggaggc
agtggttcgggaaagtccacaactattgctttgcttcaaagattttatgatcctactgaa
ggagaggttctcttggatggatacaaaataagtagacttcagctgaaatggttgagatct
caaatgggacttgttagtcaagagcctgtactctttgcaacatccataaaagaaaatata
ttgttcgggaaagaaggagcatcgatggaagatgtaataaacgcagctaaggcggctaat
gcacatgacttcattgtcaagttaccggagggatacgaaactcatgttggtcagttcgga
tttcagatgtctggtggccagaagcagcgaatcgccatagcaagggctttgatccgggac
cctaaaatcttgcttctcgatgaagctacaagtgcattggatgcacaagctgaaaggata
gtgcaggaggcgattgataaggcatctgtagggaggacaaccatcatcattgctcatcgc
ttattgacaatcaggaatgcaaatctgattgtggttcttcaaggtggtcgagtaattgaa
tcagggtcccatgatgaattaatgcaaacgaatggaagagaaggtggagaatactaccag
atggtacagttgcagaaaatggcattgcaaagcgaagcttctgatgattcagactacaaa
accgaaggaagaaaacgccacaggttgcaagttgctcaaagtccgatgagttatagatca
agtgttccgagcactccagcattgagccctttcagcccaggtctatctgtgggaacaccc
tattcctacaccatccaatttgatcctgatgatggcagtgacaatgaagacttcaaccaa
gtagctcatcctactccatcgcagtggcgtctgttggaaatgaatgcaccagaatggggc
agagccttgattgggagtatggctgcaattggctcaggagcagttcagcctataaatgcg
tactgcgtcggattacttatatctatttacttccgcaccgacaaatccgaaatcaagtca
agatccagaactttgtccttcgttttcttaggcatagctgctcttaacttcacatcaagt
ctcctccaacactacaatttcgcagtcatgggagagaagttaacaaaaagggtaagggag
aagttcttggagaagctgatgactttcgagattggttggtttgatgaagaggaaaacaca
agtgcagccatttgcacaagattggctaccgaggccaacatggttcgttcccttgttggg
gaccgaatgtcattgctggttcaagccattttcgggtccattttcgcatacgtgctagca
attatacttagctggaggttatctattgtgatgatcgcagttcaaccattagtcgttgga
agcttttatgcaaggagcatcttgatgaagagtatgtcggggaaggcgcaaaaagcacag
aaggaaggaagccaactagcaagtgaagcagtggtgaaccatagaactatcactgccttt
tcatctcagaaaagaatattggggcttttcaaggaaacattgaaaggtccgaaaaaggaa
agtgtccgacattcatggctttccggtttaggcctctttagctctcagtttttcaacaca
gcctctacagcattagcttactggtatggtgggagattattgacacaagaattaatatca
tcagagcacctctttcaagcattcttggtgttgctatttactgcttatgtcattgccgaa
gctggaagtatgaccaatgatttatcgaaaggaaacagtgcggtccgatcagtttttgcg
atcctagataggaaaagtgagattgatccggattatacatggggtctagagattaaaaag
tcgattaagggacgaatagaactgaaaaatgtgttctttgcatacccaaccagatctgac
caaatgatctttaagggtctaaaccttagaattgaagcagggaggacagtggcactggtg
ggacaaagtggttctggaaaatctaccattatcggacttatcgagagattttacgatccg
accaagggctccgttttcatcgatgcacaggacataaagaactataatgtgagaatgctg
cgaacacatattgcacttgtcagtcaagagccaaccctgtttgcaggaacgatccgtgaa
aacatcgcctacgggaaaacgaatgctaaagaatccgagattagaaaagctgcgaagctc
gccaatgctcatgaattcataagcggtatgaaggatggctacgacaccaattgtggagaa
agaggtgttcagctatcaggtggtcaaaaacaacgaatcgcacttgcacgagccatactg
aagaacccctcgattctcctactggatgaggcgaccagtgcactcgatagcgtgtcggaa
aacttggttcaagaagcacttgagaagatgatggtcaacagaacatgcgtagtcgtcgct
caccggctgtcgaccattcaaaaagccgattacatcgctgttatcaagaacggaaaagtt
gtggaacatggttcacataatgaactggtttccttgggtcgcggtggagcatattattca
ctcataaaactacagggtggtgggacttctccgtataggcaaacatga
DBGET
integrated database retrieval system
