Hibiscus syriacus (Rose-of-Sharon): 120135355
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Entry
120135355 CDS
T09559
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120135355
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsyr02000
]
120135355
04147 Exosome [BR:
hsyr04147
]
120135355
04090 CD molecules [BR:
hsyr04090
]
120135355
Enzymes [BR:
hsyr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120135355
Transporters [BR:
hsyr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120135355
Exosome [BR:
hsyr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120135355
CD molecules [BR:
hsyr04090
]
Proteins
120135355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
ABC_ATPase
Zeta_toxin
AAA_22
AAA_16
RsgA_GTPase
AAA_21
AAA_15
G-alpha
APS_kinase
DUF815
AAA_30
AAA_23
AAA_7
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
120135355
NCBI-ProteinID:
XP_039007564
LinkDB
All DBs
Position
Unknown
AA seq
1295 aa
AA seq
DB search
MASENYFNGDKDSDLHEASASNGQEEPEKVSGVKGEKQDPESTKGVEKTNTVPFYKMFSF
ADSKDILLMIIGTTAAVGNGLSMPLMTVLFGNLIDSFGNNQSNGNVVEAVSKVSLRFVYL
AMGAAVAAFLQVTCWMVTGERQAARIRGLYLKTILRQDVAFFDVETNTGEVVGRMSGDTV
LIQDAMGEKVGKFLQLISTFFGGFVVSFVRGWLLTLVMLSAIPLIVLSAGTIAIMISKLA
TRGQNAYAKAATVVEQTIGSIRTVASFTGETQAINDYNKSLVTAYKSGVQEGTTAGLSVG
VVMLILFYSYALAVWFGGKMILEKGYTGGQVLNVIMAILTGSMSLGQASPCMTAFAAGQA
AVFKMFETIKRKPEIDTYDISGKVLEDIRGDVELKDVHFSYPARPEEQIFSGFSLSILSG
TTAALVGQSGSGKSTVISLMERFYDPQAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLF
TSSIRDNIAYGKEGATMEEIRTAAELANVARFIDKLPQGLDTMVGEHGTQLSGGQKQRVA
IARAILKNPRILLLDEATSALDAESERIVQEALDRIMSNRTTVIVAHRLSTIRNADTIAV
IHQGKMVEKGSHSELLKDPEGAYSQLTRLQQVNKQSEHVADVSDITAEPFRQSILRSPLK
RSFSKGSPRNSSSNSFPEPFGLPTEMNVIDPTLDTEDPNEPSSKPPPEVSILRLAYLNKP
EIPVILIGTIFSAAYGVILPIFGILISRMIKTFYEPADVLKKDSRFWALIFLALGLASLL
ICPTRSFFFSIAGCKLIQRIRATCFDKVVCMEVGWFDEPNNSSGSIGARLSADAASIRSL
VGDALAQIVSSFASALAGVVIAFVASWQMAFIILALIPLIGVNGYIQAKFMKGFSADAKM
MYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEGPMKTGIRQGLISGIGYGLSFFF
LFSVYATSFYGGAQLVAHGKATFADVFQVFLALTMAAVGISQSSSFAPDSNKAKMAAASI
FAIIDRESKIDPSDESGRTLESVKGNIELRHVSFRYPSRPDIQIFRDLSLSIQAGMTVAL
VGESGSGKSTIISLLQRFYNPESGVITLDGVEIKTLQLKWLRQQMGLVSQEPVLFNDTIR
SNIAYGKGGNTTEAEIVAASELANAHKFISSLQQGYDTVVGERGLQLSGGQKQRVAIARA
IVKSPKILLLDEATSALDAESEKVVQDALDKVMVDRTTVVVAHRLSTIKNADVIAVVKNG
LIVEQGKHDTLINIKDGFYASLVQLHTTASTSQNL
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgaaaattatttcaatggtgataaagatagtgacttgcatgaagccagcgca
tcgaatggccaagaagagccggagaaagtctctggcgtgaagggagaaaagcaagatcct
gagagcaccaaaggagttgagaaaactaacacggttccattttacaagatgttttcattt
gctgattctaaggatatcttgttaatgatcatcggcacaaccgctgccgtcggcaacggt
ctatcgatgccccttatgacagtcttgtttgggaatctcattgattcttttgggaacaac
cagagtaatggcaacgtagtcgaagcagtctccaaggtttctttgagattcgtctacctg
gcgatgggggcagcggtggccgcgttccttcaggtgacttgctggatggtcacaggtgag
agacaggctgcacgaatacggggcctgtacttgaaaaccatattgaggcaagatgttgct
ttctttgatgtggaaacaaacacaggggaagttgttggcagaatgtctggggacacagtt
ctcatacaggacgccatgggcgaaaaggtcgggaagtttttgcagttgatatccaccttc
ttcggaggcttcgtcgtatcatttgtcagaggatggcttcttaccctcgtcatgttatcc
gctatccctctaattgtactatccgctggaactatagctataatgatatccaagctggca
acccgtggacaaaatgcttatgctaaagctgctactgtagttgaacaaacaattggttca
atccgaactgttgcatcgtttactggcgaaacgcaagccataaatgattacaacaagtca
ctcgttaccgcttataaatcaggcgtccaggaaggtactactgctggactaagcgttggc
gtagttatgctaattctattctatagttatgccttggctgtctggtttggtgggaagatg
attttggagaaagggtacactggcggtcaagtacttaatgtgattatggccatattgacc
ggttccatgtccctggggcaggcatccccgtgcatgactgcctttgcagccggtcaagct
gcagtatttaagatgtttgagaccatcaaaaggaaaccagagatcgacacctatgacata
agtgggaaagtgttggaggacattcgtggggatgtagaactgaaggatgttcatttcagt
taccctgccagaccagaggagcaaattttcagtggattctctctttctattctgagtggc
acaacagctgccttggttggacaaagtggaagtgggaaatcgactgtgatcagtctgatg
gagagattttatgatccacaagccggtgaggttcttattgatggcattaatcttaaggaa
ttccagcttagatggatcaggggaaagatcggtcttgttagccaggaaccggtgttgttt
acctcaagcataagggataatattgcatatggaaaagaaggtgcaaccatggaagagata
agaacggcggctgaacttgcaaatgttgctaggttcattgataaattacctcagggacta
gataccatggttggagagcatggaactcaactttctggtggccagaagcagagagttgca
attgcaagagcaattctgaagaaccctcgaattttgcttttagatgaagctacaagtgca
ctcgatgcagaatccgaaagaatcgtgcaagaggcattggacaggataatgagcaatagg
actactgtcattgttgctcatcgcttgagtaccattagaaatgcagatacaattgccgta
attcatcaaggaaagatggttgaaaaagggtcacattcagaactactcaaggatcctgag
ggagcttactctcagcttactcgtttgcaacaagtaaataaacagtcggaacatgttgca
gatgtatcagacattactgcagaaccatttagacaatcaatcctaagaagcccgttgaag
cgatcattcagcaagggatcacctagaaatagcagcagcaattctttcccagaacctttt
ggattacctactgaaatgaatgtcattgatcctacattagatacagaagatcctaatgaa
ccatcatcgaaaccgcctccagaggtttctatcctgcggcttgcttacctcaacaagcca
gagattcctgtgatcttaattggaactattttttcagctgcctatggtgtgatacttccg
attttcggtatcctaatttcccgtatgatcaaaacattttatgagccagctgatgtattg
aaaaaggattcgagattctgggcactgatatttttggcccttggcctggcatcattattg
atatgtccaacacgatcgttcttcttttctatcgctggttgtaaattaatccaacgaatc
agagcaacatgtttcgataaagtggtctgcatggaagttggttggtttgatgaacccaat
aattcaagtggttcaattggtgcaaggctctcagcagatgcagcctcgatacgttccctt
gtcggagatgcactagctcagatagtctcgagctttgcatcagcactggctggtgtggtc
attgctttcgttgcaagttggcagatggcatttattatcctagcattgatccctctgata
ggggtcaatggatacattcaagcaaaattcatgaagggattcagtgcagatgcaaaaatg
atgtacgaggaggccagccaagttgctaatgatgcagtcgggagtattagaacagttgct
tccttttgtgcagaggaaaaggtaatgcaactctataaaaagaaatgtgagggtccgatg
aaaacagggataagacagggtttgatcagtggaataggatatggactttcgtttttcttt
ttgttttctgtttatgcgacaagtttctatggaggagctcaacttgtggcacacggaaag
gcgacatttgcagatgtttttcaagttttcttagctttaaccatggcagctgttggaatt
tctcaatcaagttcctttgctcctgattccaacaaagccaagatggcggctgcttccata
tttgcaattatcgaccgcgagtctaagatagatcctagtgatgagtccgggaggacacta
gaaagtgtgaagggaaatatcgagcttcgtcatgtcagttttaggtatccatcaaggcca
gatattcaaatcttccgagacttgagcttgtctattcaagctggcatgaccgtcgccctg
gttggagaaagcgggagtgggaaatctacaataatatcattattgcaaagattttacaat
cctgagtccggagttatcactctcgatggagtcgaaatcaaaacactccaactgaaatgg
ctgaggcaacagatgggacttgtgagccaggaacctgtcttgtttaacgatacaatccgt
tccaacattgcatacggaaaggggggaaatacaaccgaggcagaaatcgtagctgcatca
gagttggccaatgctcacaagttcatcagttcattacaacagggttacgacaccgtcgtc
ggggaacgaggacttcaattgtcaggaggacagaagcagcgggtagccatagcacgagcc
atcgttaaaagtccgaagatacttctattagacgaggcgacgagcgcattggatgcagaa
tcagagaaagtggttcaggatgcactagataaagtcatggtggaccgcacaacagtcgtg
gttgctcataggctatcaacaatcaagaacgcagatgttattgccgtggttaaaaatggg
cttattgtagagcaaggaaagcatgacactttgataaacatcaaagacggcttttatgct
tcattggtgcaacttcacacgactgcttccacttcgcaaaacttgtaa
DBGET
integrated database retrieval system
