Hibiscus syriacus (Rose-of-Sharon): 120141229
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Entry
120141229 CDS
T09559
Name
(RefSeq) sister-chromatid cohesion protein 3-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120141229
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120141229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SCD
STAG
PDS5
HEAT
Cnd1
HEAT_2
Motif
Other DBs
NCBI-GeneID:
120141229
NCBI-ProteinID:
XP_039012092
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MDDDAALPSEITTRHAKRARVNTRVAGDEPDEANGDNAENQERNSDGSPGPGEWEGSPDD
FQEIRPKTKRHRASEGTSYFPNRFEEILIEVIKGDGKHISQAVKRWVERYERNQKHAMVE
LFMMLFEACGAKYYIKEEFLDETDVDDVVVALVNLARKGEVEDYQSSKKEFKNFKENLVS
FWDTLVIECQNGPLFDKDLFDKCIDYIIALSCTPPRVYRQVASMIGLQLVTSFISVAERL
AVQRDTTQRQLNAERKKRPDGPRVESLNSRLSTTHEQKLVIDEMMRKIFTGLFVHRYRDV
DPNIRMSCIRSLGVWILSYPTLFLQDLYLKYLGWTLNDKSAGVRKAAVLALQNIYEVEDN
VPTLSLFTERFSNRMIELADDVDVSVAVCAIGLVKQLLRHQLIPDDDLGSLYDLLIDDPP
EIRRAIGELVYDHLIEQKFNSSQSGSKGNESEVHLGRMLQILREFSTDPILSAYVIDDVW
EYMKAMKDWKCIISMLLDENPLIELTDEDATNLARLLFASVKKAVGERIVPASDNRKQYF
NKAQREMFENNRRDLTVAMMKNYPLLLRKFMVDKVKISSLVEIIVYMNLELYSLKRQEQN
FRNTLLLIKDAFFKHGEKDALRSCVKAITFCSTESRGELQDFSRNKLKELEDELLDKLKS
ATKEVIDGEDEYSLLVNLKRLFELQLSRPASIEEIYGDCITILRSFRNLDDEVVSFLLLN
MSMDVAWSFHSIINLETVSEGSLCSLLSKRDTLLEELEYFLNTPPEVREGSNSGNQLACW
VCIILADIWFLFRKTVFSSTKLERLGYCPDARTLQKFWTLCEKRLKISDDTEDEDINKEY
IEDTNRDNVMIVVAKLIASDTVPKDYLAPEVISHFVMHGAGIAEIVKNLITVLKEKNDVS
GVFLEALKRAHYRHLELSESDDESLKSESFQECKNLASRLAGTFVGASRNKHRPEILKIV
KSGIEYAFQKPPKQLSFLEASVLHFASRLPPPDIRDILKDVQKRTENVNTEEDPSGWRPY
NTFYDSLQEKCAKNDGIHDKKEQTTARKRGRPRKRRNIEGRRLFDERNSSEEEDSINTSD
QEDAQVEEDEEEDNAPLIHSLKSSAKLRSLRVSRQEN
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgacgcggcgctaccttccgaaatcacaactcgccacgctaaacgagctagg
gttaatactcgagtcgccggagacgagcctgacgaggcaaacggcgacaacgcggagaat
caagaaaggaacagcgatgggagtcccggcccaggggagtgggagggctcaccagatgat
tttcaagaaattcgtcccaaaactaagcgacatcgagcttctgaggggacttcttatttc
ccgaacagatttgaagagatattaatcgaggttatcaaaggtgatggcaaacatatttct
caagctgtcaagcgctgggttgagcgatatgagaggaatcaaaaacatgccatggttgaa
ctcttcatgatgctttttgaggcatgcggggcaaagtattacatcaaggaagagtttctc
gacgagactgatgttgatgatgttgtggttgctcttgtcaaccttgctagaaaaggggaa
gttgaagattatcagagttcaaaaaaggaattcaagaatttcaaggagaatcttgtttca
ttctgggacactttggttattgagtgccagaatgggccattgtttgataaggatttgttt
gacaagtgcatagactatataattgccttgtcatgcacacctccaagggtttaccgtcaa
gttgcttccatgataggtctccagctagtcacatctttcatttctgtagcagaaaggctt
gctgtacagcgtgatactactcaaagacagttaaatgctgaaaggaagaaaagacctgat
ggacctcgcgtggaatcactaaatagcaggttgtcaacaactcatgagcagaaacttgta
atagatgagatgatgcgcaaaatcttcactgggttgtttgtgcatcgatatagagatgtt
gaccctaatatcagaatgtcatgcatacggtcactgggtgtttggattttgtcatatcct
acattgttcttgcaggatctatacttgaagtaccttggatggactctaaatgacaaaagt
gctggcgtaagaaaagctgctgtccttgctttgcaaaatatctatgaggtggaggataac
gtgcccactcttagtctctttactgaaaggttttctaaccggatgattgagcttgctgac
gacgttgatgtttccgtggctgtatgcgcaatagggcttgtaaaacaattacttaggcat
cagcttataccagatgacgacttgggttctttgtatgatctacttattgatgatccacca
gaaatcaggcgtgctataggagaattagtatatgatcacttaattgaacaaaaatttaac
agttcccaatctggctcaaaaggcaatgagagtgaggttcatcttggcagaatgttgcag
atattacgggagttttcaacagatcccattttaagtgcatatgttatcgatgatgtctgg
gagtacatgaaagccatgaaggattggaagtgtatcatttccatgcttttggatgagaat
ccattaatagaacttactgatgaagatgcaacaaacctggctaggcttctttttgcttct
gttaaaaaggctgttggagagaggattgtgcctgcttctgacaatcgaaagcaatatttc
aataaagctcaaagagaaatgtttgaaaacaataggcgggatttaactgttgccatgatg
aagaactacccattacttcttcgtaaattcatggttgacaaggttaaaatttcatcattg
gtcgagattattgtatatatgaaccttgagctttattctctgaagagacaagagcagaat
ttcagaaatactcttcttctcatcaaagatgcatttttcaagcacggtgagaaggatgca
ttgagatcttgtgttaaggctattacattctgttccactgagagtcgaggagagctgcaa
gatttttctcgtaacaaactaaaggagcttgaggatgagcttcttgataagcttaaatct
gcaactaaagaagtgattgatggagaggatgagtattctcttctggtgaatttgaaaagg
ttgtttgagcttcaattgtcgaggcctgcatcaattgaggaaatttatggagattgtatt
acaatcttgcgcagcttcagaaacttggatgatgaagttgttagttttctgctgctgaat
atgtcaatggatgtagcctggtcttttcattctattataaaccttgaaactgtctctgaa
ggaagcttatgctctctcctgtctaaacgtgataccctgttggaggaacttgagtatttt
cttaatactcctcctgaagtcagggaagggagtaattcaggaaatcagctagcctgctgg
gtttgtattatactagcagatatctggtttctgtttaggaagacagttttttcgtcaaca
aagcttgaaagattaggatattgtcctgatgctcgtactcttcagaagttttggaccctt
tgtgagaagcggctcaaaatttcagatgacacagaagatgaagatattaacaaagagtat
attgaggatacaaatagagacaatgtcatgattgttgttgcaaagttgattgctagtgat
acagtcccaaaggattatcttgctcctgaggtaatttctcattttgtgatgcatggagct
ggcattgcagagattgtaaagaatctgatcacagttttgaaggaaaaaaatgatgtctct
ggagtttttttagaagctttgaagagggcccactatcgacatttagaactctctgaaagt
gatgatgaatccttgaaaagcgagtctttccaggagtgcaagaacctggcttctcggctt
gctggaacattcgttggtgcttctcggaacaagcacaggcccgagattttaaagattgtt
aagtcaggcatcgagtatgcctttcaaaaacctccaaaacagctgtcttttctggaagct
tctgtgctacattttgcatctcgacttcctccacctgacatcagagacattctgaaagat
gtccagaagaggacagagaatgtaaatacagaagaggatccaagcgggtggcgcccctat
aatacattttatgatagtttgcaagagaagtgtgcaaagaatgacgggattcatgataag
aaggaacagactactgcaagaaagaggggtcgtcctaggaagcggcgaaatattgagggt
aggagactttttgatgagcgtaattcaagtgaagaagaggattcaattaacacgtcagat
caagaagatgctcaggtggaggaagacgaggaagaagataatgctcctctgatacattcg
ctcaagtcctctgctaagttgaggtcattaagagtctcgagacaagaaaactga
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integrated database retrieval system
