Hibiscus syriacus (Rose-of-Sharon): 120142205
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Entry
120142205 CDS
T09559
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03013
Nucleocytoplasmic transport
hsyr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120142205
03015 mRNA surveillance pathway
120142205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120142205
03041 Spliceosome [BR:
hsyr03041
]
120142205
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120142205
Spliceosome [BR:
hsyr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
120142205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
120142205
NCBI-ProteinID:
XP_039012880
LinkDB
All DBs
Position
Unknown
AA seq
857 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLLKSQKFAPELEHLVDITKVKMDVFRPWIATRVTELL
GFEDEVLINFIYGLLDGKEVNGKEVQISLTGFMEKNTGKFMKELWILLLSAQKNASGVPQ
QFLDAKAEETRKKKAESDRIAIEIQKKKDKESRELEQERLRKMDNGDERKAGDAGLDSSS
KNMLPKGLNVCPKEERDADRRNGVGRKSVSRSPCSTGRPPSPRRPHSRSVSRSFSNSRSY
SDGKKKSRSVSRSPLPRRGSISFDKMYLSPRRSPSPRSRYSPRSSRSPARRRSSYSSQTS
RSLSSRGSPSPVRPRLHSPYRYRSPSPIRRRRSPSPIRRRRSPSPIQRRRSPSPIRRRRS
PSPIRRRRSPSPIRRRRSPSPIRRRRSPSPIRRRRSPSPIRRRRSPSPIRRHRSPVSMRH
RRSPSLVHHHRSPSDMHHISHSPVSHKSPPSLFRHRSPSLVQQHRCRSSSTPRHRSSSPA
RRRSPASSLRSITPSQGKSPLHQSSSASPVQCRSSPVRRLQKDRRSSLLFPGERQRMSGK
LSPVSGFPSHLRKQSTSKDRRSSSPHDSPMRHCRERIACDDSFSPEQKSRELKGQLDSKV
SGSKNGASRSRHSPPLSKQRVSPTKVHTPERLTGIQSTEMRNDLEMESERSSGKRVYLGT
SDQHRSPALSQDSYQGEKQSSPHLGAGKRSDEKSHSRQNNMKDGDKHCKVETSPMALEKV
DHNNNGLEGSDKHKTKHKERRKHKRSKRREVTSDDDSSYDSEIEDRKDAKRRRKEEKRLR
KEEKRRRRNERRRRREERHAEKLKMKGRDKDDEDEDAEKRKSHPSFDEEAETEQKKLEIE
LRNRALESLKAKKGITG
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggatttttccggggtacatcggctgatcaagatactcggttctcgaataag
caggcaaagctactgaaatcgcagaaattcgctcccgaattggagcatctggttgatatc
acgaaggttaagatggacgtttttagaccttggattgcgactcgggtaactgagcttctt
ggttttgaagatgaagttcttattaacttcatctatggtcttcttgatggaaaggaggtt
aatggcaaggaagtccagatatccctcactggattcatggaaaagaatactggaaagttt
atgaaagagctttggattctattgcttagtgctcagaaaaatgcaagtggtgttcctcaa
caattcttggatgccaaagcagaagaaactaggaagaaaaaggcagagtcagatcggata
gcaattgagattcagaagaagaaagataaggaaagtagagaacttgaacaagagagattg
aggaagatggacaatggggatgaaagaaaggctggtgacgcggggttggattcatcatca
aagaatatgctgccaaagggtttgaatgtatgccccaaggaagagagagatgctgaccga
aggaatggtgtcggaaggaagagcgtttcccgatctccatgttcaactggtcgtcctcca
tcccctcggagaccacattctcgttcagtcagcagatcattttctaattcaagaagctat
tcggatggcaaaaagaaatctaggagtgtatctagatcacctctacctcgacggggctcc
atttccttcgataagatgtatctttcccctagaagatctccaagtcctcgatctagatat
tcacctcgatcgtcacgctctccagcaagaagaagatcatcttattctagtcaaacgtct
cgatctctctcatctcgaggatcaccatctcctgttaggcctagattgcattctccttat
cgatacagatcaccatcacccatccggcgtcgcaggtcaccatcacccatccggcgtcgc
aggtcaccatcacccatccagcgtcgcaggtcaccatcacccatccggcgtcgcaggtca
ccatcacccatccgacgtcgcaggtcaccatcacccatccgacgtcgcaggtcaccatca
cccatccgacgtcgcaggtcaccatcacccatccgacgtcgcaggtcaccatcacccatc
cggcgacgtagatcaccctctcctatacgacgtcatagatcaccagtatcaatgcgacat
cgcaggtctccatctcttgtccatcatcatagatctccatcagatatgcatcatatatct
cattcacctgtgagccacaaatctcctccatcactcttccgacacaggtcaccctccctt
gtgcaacagcaccgttgtagatcttcatcaacaccaagacataggtcgtcatcccctgca
cgacgtagatcaccggcttccagccttaggtcaataactccttcccagggtaagtctcca
cttcatcaatcaagttctgcctctcctgtgcaatgtagatcttcaccagttaggaggctt
cagaaggatcgaaggtcatctttgctttttcctggagaaagacaacgaatgtctgggaag
ttgtctcctgtctctggatttccctcacatctgaggaagcagtctaccagtaaagatagg
aggtcatcaagtccgcatgacagtcctatgagacattgtagggagcgaattgcttgtgat
gatagcttcagtcctgaacagaaatcgagagaactgaaaggtcagctggacagtaaagtc
agcgggagtaaaaatggagccagcagaagcaggcattcaccaccattgagtaagcagagg
gtttctcctacgaaggttcatacccctgaacgattgacaggcattcagtctactgaaatg
aggaatgaccttgaaatggagagcgagaggtcttctggaaaaagggtttatctgggaact
tcagatcaacatagatcacctgcattatctcaggactcatatcaaggtgagaagcaaagt
tcaccacaccttggagcaggaaaaagatctgatgagaagagtcattctcgtcaaaataat
atgaaggatggtgataaacattgcaaagtggaaacctcaccgatggctcttgaaaaggtt
gatcataataacaatggtctggaaggaagtgataagcacaaaacgaagcataaggagagg
agaaagcataaaaggtctaagaggcgtgaagttacatcagatgatgattctagctatgat
tctgaaattgaggataggaaagatgctaagaggaggaggaaggaagaaaagagattaaga
aaggaggagaagcgtcgacgtcgcaatgaacggcgtcgcagaagagaagagagacatgcg
gagaagcttaaaatgaaaggtcgggataaggatgatgaggatgaggatgcagagaagaga
aagtctcatccaagttttgatgaagaggcagagactgagcagaagaagcttgaaattgag
ctaaggaatcgggcacttgagtcactcaaagcaaagaagggcatcactggctga
DBGET
integrated database retrieval system
