Hibiscus syriacus (Rose-of-Sharon): 120146536
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Entry
120146536 CDS
T09559
Name
(RefSeq) ABC transporter B family member 1-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120146536
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsyr02000
]
120146536
04147 Exosome [BR:
hsyr04147
]
120146536
04090 CD molecules [BR:
hsyr04090
]
120146536
Enzymes [BR:
hsyr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120146536
Transporters [BR:
hsyr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120146536
Exosome [BR:
hsyr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120146536
CD molecules [BR:
hsyr04090
]
Proteins
120146536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
Zeta_toxin
AAA_16
AAA_22
AAA_29
AAA_15
RsgA_GTPase
nSTAND1
AAA_5
SbcC_Walker_B
AAA_25
APS_kinase
DUF815
DUF87
Rad17
DUF1360
Motif
Other DBs
NCBI-GeneID:
120146536
NCBI-ProteinID:
XP_039015996
LinkDB
All DBs
Position
Unknown
AA seq
1363 aa
AA seq
DB search
MSQDLEDTKTMEQWKWTEMQDLELVSPSPSDPFKTNPSTPNKKPEKTQVEAQAYQESAEE
RGEMESSGASSSSDTKKDGSNNGGGGGGGNGERAVEAPSVGFGELFRFADGLDCVLMGIG
SLGALVHGCSLPIFLRFFADLVNSFGSNTNNMDKMMQEVSKYAFYFLVVGAAIWASSWAE
ISCWMWTGERQTTKMRIKYLEAALNQDIQYFDTEVRTSDVVFAINTDAVMVQDAISEKLG
NFIHYMATFVSGFVVGFTAVWQLALVTLAVVPLIAVIGAIHTTTLAKLSAKSQEALSQGG
NIVEQTVVQIRVVMAFVGESRALQAYSSALKVAQKFGYKTGFAKGMGLGATYFVVFCCYA
LLLWYGGYLVRHHYTNGGLAIATMFAVMIGGLGLGQSAPSMSAFAKAKVAAAKIFRIINH
KPGIDRNSELGLELESVTGLVELKNVDFAYPSRLDVRILNNFSLTIPAGKTIALVGSSGS
GKSTVVSLIERFYDPTSGEVLLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIKENILLG
RPDANHIEIEEAARVANAHSFIVKLPDGFDTQVGERGLQLSGGQKQRIAIARAMLKNPAI
LLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGT
HDELISKGENGTYAKLIRMQETAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSP
YSRRLSDFSTSDFSLSLEASHPNYRMEKLVFKEQASSFWRLAKMNSPEWVYALVGSIGSV
VCGSLSAFFAYVLSAVLSVYYNPDHAYMKREIGKYCYLLIGLSSAALLFNTLQHFFWDIV
GENLTKRVREKMLTAVLKNEMAWFDQEENESARISGRLALDANNVRSAIGDRISVIVQNT
ALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDLEAAHAKATQLAGEA
IANIRTVAAFNSENKIVGLFSSSLQTPLKRCFWKGQIAGSGFGVAQFSLYASYALGLWYA
SWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEP
DDRDATQVPDRLRGEVELKHVDFSYPSRPDVLIFRDFNLRVRAGKTLALVGPSGCGKSSV
IALIQRFYEPASGRVLIDGKDIRKYNLKSLRKHIAIVPQEPCLFASTIYENIAYGHEAAT
EAEIIEAATLANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAIARALVRKAELMLLDE
ATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEKGSHSHLL
KNYPDGCYARMIQLQRFTHSQVVGMTSDLSSSAKPKDDEEREA
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagatttggaagatacaaagacgatggagcaatggaaatggaccgaaatgcaa
gaccttgaacttgtgtctccttcaccatctgacccttttaaaaccaacccatcgacccca
aataaaaaaccggagaaaactcaagttgaagctcaagcttatcaggaaagtgcagaggag
agaggagaaatggaaagttctggagcttcttcttcatcggataccaaaaaagatgggagt
aataatggtggtggtggtgggggcgggaacggagagagggcggtggaagctccttcagtt
ggttttggtgaactctttagatttgccgatggtttggattgtgtgttgatgggaattggg
tctcttggtgctcttgtacacggctgttctttgcctatattccttcgtttctttgccgat
cttgtcaattcttttggttctaatactaataacatggacaagatgatgcaggaagtttca
aagtatgcattttacttccttgtggtgggtgctgcaatttgggcgtcttcatgggcagaa
atatcgtgttggatgtggaccggagagaggcaaacaacgaagatgaggatcaagtactta
gaggcagctttgaatcaggacattcaatactttgacactgaggttagaacatctgatgtt
gtgtttgccatcaacactgatgcagtgatggtccaggatgccattagcgagaagttggga
aatttcattcactacatggcaacctttgtgtctggttttgtggtgggttttacagctgta
tggcaattggctttggtaacacttgcagtggttcctctcattgctgtgattggagcaatc
cataccaccacactagccaagctctctgcaaagagccaagaagctttatctcaaggagga
aatattgtagaacagacggtcgttcaaattcgagtcgttatggcttttgttggtgaatca
agagcattgcaagcctactcgtcagcattgaaggtcgcacaaaagttcggttacaaaact
ggatttgcaaaaggaatgggattgggggcaacttactttgttgtcttttgttgttatgct
cttcttctttggtacggaggttatcttgttaggcatcattacaccaatggaggacttgcc
attgccaccatgtttgctgttatgataggtggattgggtttggggcagtctgcaccaagc
atgtctgcatttgccaaggccaaagtggcagcagctaaaatcttccgcataatcaatcac
aaacccgggattgatagaaatagcgagttgggtctggagttggagtccgttaccggttta
gttgaactgaaaaatgtggattttgcatatccatcaaggttagatgtaaggatccttaac
aatttctcccttaccattcctgctggaaaaaccatagctttggtgggaagcagtggttcg
ggtaaaagtaccgtcgtctccctcatcgaaaggttctacgatcccacctcaggagaagtg
ctgcttgatgggcatgacataaagacattaaagctgagatggttgaggcaacaaatagga
cttgtgagccaagagcctgccctctttgccaccaccattaaagaaaacattcttttgggt
aggcctgatgcgaaccatattgagattgaagaagctgccagagtggccaatgcgcattca
ttcattgtaaaacttcccgatggtttcgacactcaggttggggagagaggacttcaactc
tcgggtgggcagaagcagagaattgccatagccagggcaatgttgaagaacccggcaatc
cttctcttggacgaagcaactagtgcactagactctgaatcagaaaagctggttcaagag
gctcttgatcgtttcatgattggaaggacaactctcgttatcgcacatcgcctttccacc
attcgcaaggctgatcttgtagctgtactccagcaggggagtgtttctgaaatcggaact
catgatgagctcatttccaaaggagaaaatggtacctatgccaagctcattcgaatgcaa
gaaacggcacatgaaactgccctaaacaatgctcgaaaaagtagtgcaaggccttctagt
gcccggaactcagtaagctcaccaattatagctcggaattcatcatatggccgatcaccg
tattcgcggaggctttctgacttctctacttctgattttagtctttcccttgaggcctca
caccctaattaccgaatggaaaagctcgtcttcaaggagcaagctagttccttttggcgc
cttgcgaaaatgaattctcctgaatgggtttatgctttggttggttctataggttccgtc
gtctgtggatccctgagtgctttctttgcatatgttctaagtgctgtcctcagtgtctac
tacaacccggaccatgcttacatgaaaagagaaattgggaaatactgctatttattgatt
ggactttcgtcagctgcccttctcttcaacacactacagcattttttctgggatattgtg
ggagaaaatctcacaaaacgagtgagagagaagatgctgacagcagtgctgaaaaatgaa
atggcatggtttgatcaagaggaaaatgagagtgctcggatttcaggaaggctggctctt
gatgccaacaatgtccgatcagccataggagaccgcatttcagttattgtgcagaacaca
gctctcatgttagttgcctgcactgcgggatttgttttgcagtggcgccttgcccttgtc
ctcattgcagtctttcctgtggttgtagcagcaactgttttgcagaaaatgtttatgaaa
ggtttctcaggagatttagaagctgctcatgcaaaggctacacaactagccggagaggcc
attgccaatataagaactgttgccgccttcaattcagagaacaaaattgttggtctattc
tcttcaagccttcaaacgccattgaagcgctgcttctggaagggacaaattgcaggaagt
ggatttggggtagctcagttttcactatatgcttcttatgcccttggtctttggtatgct
tcctggcttgtgaagcatgggatatctgatttttcaaagactatccgggtctttatggtt
ctcatggtctccgctaatggcgcagctgaaacattgaccctggctcctgacttcatcaag
ggaggtcgagccatgcggtcagtctttgatcttcttgaccgtaaaactgagatagagcct
gatgaccgtgatgccacacaagttccagaccgccttcgcggagaagttgaactaaagcat
gttgacttctcttacccctcacgtcctgatgtcctaatcttccgtgactttaatctccgt
gtccgtgctggaaaaactcttgcccttgttggtccaagtggatgtggtaagagctcggtc
attgcccttattcagagattctatgagccagcatctggccgtgttttgatcgatggaaag
gacattaggaaatacaacctcaaatccttgagaaaacacattgcaattgttccacaagaa
ccatgcctctttgcttctaccatctacgaaaacattgcctatggacatgaggcggcaact
gaggccgaaatcatcgaggcagctacactagccaatgcgcacaagttcatatcttcattg
cccgacggttacaaaacatttgtcggggagagaggagttcaactttccgggggccaaaaa
caaagaattgccattgcgagggctctagtgaggaaggcagagcttatgctgctcgatgag
gcaacaagtgcccttgatgctgagtctgagagatcagtccaagaggcactagaccgcgcc
tgctctgggaaaaccacaattgtggttgctcatcggttgtcgacaatccgaaatgctcat
gtaattgcagtgattgatgatgggaaagttgcagagaaaggatcccattcacatttactt
aaaaattatcctgatgggtgctatgcccgcatgatacaattacaaaggtttactcatagt
caagttgttggaatgacatcagacttaagttcttcagcaaaacctaaagatgacgaggag
agagaagcttaa
DBGET
integrated database retrieval system
