KEGG   Hibiscus syriacus (Rose-of-Sharon): 120155535
Entry
120155535         CDS       T09559                                 
Name
(RefSeq) general transcription factor IIH subunit 2-like
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03022  Basal transcription factors
hsyr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    120155535
  09124 Replication and repair
   03420 Nucleotide excision repair
    120155535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsyr03021]
    120155535
   03400 DNA repair and recombination proteins [BR:hsyr03400]
    120155535
Transcription machinery [BR:hsyr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     120155535
DNA repair and recombination proteins [BR:hsyr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     120155535
SSDB
Motif
Pfam: Ssl1 C1_4 VWA_2 VWA IBR Tfb4 VWA_3
Other DBs
NCBI-GeneID: 120155535
NCBI-ProteinID: XP_039023000
LinkDB
Position
Unknown
AA seq 421 aa
MNNGAGKRINGGVEEDDDEDDVNGGLDAWERTYTDERSWESLQEDESGMLRPIENQALYH
SQYRRRLRSLSSTAARIQKGLIRYLYIVIDLSRAASEMDFRPSRIAVIAKHVEAFIREFF
YQNPLSQVGIVTIKDGVASCLTDLGGSPESHINALMKKLECSGDSSLQNALDLVDGYLNQ
IPSYGHREVLLLYSALSTCDPGDIMETIQKCRKSKIRCSVIGLAAEMFICKHLCQETGGT
YSVALDESHFKELILEHAPPPPAIAEFAVANLIKMGFPQRAAEGSISICSCHKEAKVGAG
YTCPRCKARACELPTECRVCGLTLVSSPHLARSYHHLFPIAPLDEVPSSRLNDPIRKQQR
NCFGCQQNLLNSGNKVGLAVVCPKCKRYFCLDCDIYIHESLHNCPGCDSFRHSKAAAANE
D
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaacaacggagcgggaaaacggatcaatggtggagttgaagaggatgatgatgaagat
gatgtcaatgggggtcttgatgcatgggagagaacttacaccgatgagagatcgtgggaa
tctttgcaagaggatgaatcggggatgcttcgccccattgagaaccaggcactttatcat
tcacagtatcgtaggcgccttcgttccctttcatccactgctgctcggatacaaaagggt
ctcattcgttatctttacattgttatagatctttccagggcagcttcagagatggatttt
cgaccaagtcgaattgctgtcattgcaaaacatgttgaggctttcatccgggagttcttt
taccaaaatcctcttagtcaagttggcattgtgactataaaagatggggttgctagctgc
ttaacagatctcggtggtagtcctgaatctcatatcaacgctttgatgaagaagttggaa
tgttcaggtgattcctccttgcagaatgcattggatctcgtggatggctatctgaatcaa
attccatcatatggtcatcgtgaagttcttttactgtattctgctctgagtacttgtgat
cctggagatataatggagaccattcagaaatgcaggaaatctaaaataagatgttcagtt
attggcctcgctgcagaaatgtttatatgcaaacatctctgccaggaaaccggaggaaca
tactctgttgcactcgatgagtcccattttaaagagctaatattggagcatgcaccgcct
ccaccagccatagcggaatttgcagttgctaatttgatcaagatgggattcccacaaaga
gcagctgagggttctatatcgatttgttcatgtcataaagaagctaaggtaggtgcaggt
tacacttgtcccagatgcaaagcccgtgcatgtgagctcccaaccgaatgccgcgtctgc
gggttgacacttgtgtcttcaccccatttggctagatcatatcatcatctctttcctata
gcaccattggacgaggtgccatcatctcgtttaaatgatccaatccgcaaacagcaaaga
aattgtttcgggtgccaacaaaacctcctcaattcaggaaacaaagtcgggcttgccgtc
gtgtgcccgaagtgcaaacggtacttctgcctggactgtgacatttacattcacgagagt
ctgcacaattgccctggttgtgatagcttcaggcattccaaggcagccgctgcaaatgaa
gattag

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