Hibiscus syriacus (Rose-of-Sharon): 120156197
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Entry
120156197 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 20-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120156197
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsyr02000
]
120156197
04147 Exosome [BR:
hsyr04147
]
120156197
04090 CD molecules [BR:
hsyr04090
]
120156197
Enzymes [BR:
hsyr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120156197
Transporters [BR:
hsyr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120156197
Exosome [BR:
hsyr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120156197
CD molecules [BR:
hsyr04090
]
Proteins
120156197
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_15
Zeta_toxin
AAA_22
AAA_16
DUF87
Motif
Other DBs
NCBI-GeneID:
120156197
NCBI-ProteinID:
XP_039023526
LinkDB
All DBs
Position
Unknown
AA seq
1403 aa
AA seq
DB search
MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPSAESAAAAAAQAEAEEEMEEAEE
LEQTPAAVPFSRLFTCADQLDWALMLVGSIAAAAHGTAPVAYLHFFAKIVHVLGIGSSVP
ESLDEQFERFTELALTIVYIAVGVFVAGWIEVSCWILTGERQTAVIRSNYVQVLLSQDMS
XFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYVHNMATFVSGLIFGFTNCWEITLITLA
TGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAISYVRTLYAFTNETLAKYSYATS
LQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHNRAHGGEIITALFAVIL
SGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSGSNQEGNILPSLQGNIEFRNVYFSYL
SRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLK
LEWLRSQIGLVTQEPALLSLSIKDNIAYGRDVTLDQIEEAAKIAHAHTSISSLERGYETQ
VGRGGLALTEEQKIKLSIARAVLLNPTILLLDEVTGGLDFEAERTVQEALDLLMLGRSTI
IIARRLSLIRNADYIAVMEEGQLIEMGTHDELLAFDGLYAELLKCEEAAKLPRRTPVRNY
KEMSTFQIEKESSSAYSFQESSSPKLIKSPSLQRVPGVFRAHDGAFNSQESPKAHSPPPE
KMHENGLPVDGVDKEPSVRRQDSFEMMLPELPKLDVQSTQEQKSNGSDPESPVSPLLTSD
PKSERSHSQTFSRPLSHAGDIPMKAKEAHHKEAPSFWRLAQLSFAEWLYAVLGSIGAAIF
GSFNPLLAYAIALIVTAYYRRREQNDLRDEVDRWCLIIACMGIVTVIANFLQHFYFGIMG
EKMTERVRRMMFSAMLRNEVGWFDEEENNADTLSMRLANDATFVRAAFSNRLSIFVQDST
AVIVALLIGLLLHWRLALVALATLPILTVSAFAQKLWLAGFSKGIQEMHRKASLVLEDAV
RNIYTVVAFCAGNKVMELYRLQLKKILRKSFFHGMAIGFAFGFSQFLLFACNALLLWYTA
LCVKRGYVDLPTAVKEYLVFSFATFALVEPFGLAPYILKRRKSLASVFEIIERVPKIEPD
DNSALKPPNVYGSIELKNVDFCYPTRPEMLVLSNFSLKVNGGQTLAVVGVSGSGKSTIIS
LIERFYDPVAGQVLLDGRDLKQYNLRWLRNHLGLVQQEPVIFSTTIKENIIYARHNASEA
EMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEAS
SSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLVA
KNGLYVRLMQPHFGKGLRQHRLV
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgatgatatcaagaggtttattcgggtggtcgccaccccacatacagccgttgacacca
gtatcggaggtttcggagccgccggaatcgccttctccgtacttggacccaagtgcggaa
tcagcagctgcggcggcggcgcaggcggaggcggaggaggaaatggaggaggctgaagag
ctggaacaaacacccgctgctgttcctttctcgaggctcttcacctgtgctgaccagctt
gattgggctctcatgctcgttggatcgattgctgctgctgctcatgggaccgctcccgtt
gcttacttgcatttctttgcgaagattgttcatgttcttggaattgggtcgtcagttccg
gagagtttggatgagcaatttgaaaggtttacagagcttgctttaactattgtttatatt
gctgtgggtgtttttgttgctggctggattgaggtttcatgctggattttgacgggagag
cggcagactgctgtcatcaggtcaaactatgtacaagttttattgagccaagatatgagc
ntttttgatacttatgggaataatggagacatagtgagtcaagtattgagtgacgtattg
ctcatccagtctgctcttagtgaaaaagttggaaattacgttcataatatggctacattt
gtcagtggtctaatttttggttttaccaactgctgggagatcacactcataactctagcc
actggtccattcattgttgctgctgggggcatatccaatatatttcttcataggcttgct
gagaacattcaagatgcttatgctgaggcagctagcattgctgaacaggcgatctcttat
gttaggaccttgtatgcatttactaatgaaactttggccaaatattcttatgcgacctct
ttgcaagcaactttgagatatggtatattgattagtcttgtgcaagggcttggtcttgga
tttacgtatgggcttgcaatatgttcttgtgccttacaactttgggttggaaggttcctg
gtcactcataatagggctcatggtggtgaaataatcacagctctttttgctgtaatttta
agtggccttgggctgaaccaagccgctacaaatttctattcatttgaccaaggacgaatt
gctgcttatagactttttgagatgattagtcggtcatcctctggttctaatcaggagggg
aacatcctaccctcccttcaaggaaatatagagtttcgcaatgtatattttagttatctc
tctcgaccagagatccctatattgagtggattttacctcactgtacctgctaaaaaggct
gtggcccttgttggcagaaacggctctgggaaaagtagtattattccacttatggaacgg
ttttatgatcctacattaggggaagttcttctggatggagagaacattaagaacctaaag
ctggagtggctgagaagccaaataggacttgttactcaggaacctgcattactcagtttg
agcataaaagataatattgcttatgggcgagatgttacacttgatcaaattgaagaagct
gcaaaaatagcacatgcacatacatctattagctcgcttgagagaggatacgagacacag
gtggggaggggtggcttagcattgacagaagaacagaaaatcaaactttctattgctaga
gctgtgcttttgaacccaacaatccttctgctcgatgaggttactggtggactcgatttt
gaagctgaaagaacagttcaggaagctctagatcttctgatgttggggcgttcaactata
ataattgctcgacgtcttagtctcatacgaaatgctgattatatagctgtgatggaggag
ggtcagctgattgaaatgggtacacatgatgagttactagcctttgatggcttgtatgca
gagctccttaaatgtgaagaggcagcaaaacttccaaggaggacgccagttaggaactac
aaggagatgtcaactttccagattgaaaaggagtcttcatcggcttacagcttccaagaa
tcatcatctccaaaattgatcaaatcaccttctcttcaaagagttcctggtgtatttcga
gcccatgatggtgcttttaactcacaagaatcacctaaggctcatagtccaccaccagag
aaaatgcacgagaatggtttgcctgtggatggtgttgataaggaaccgtcagtcaggagg
caggatagttttgaaatgatgctaccagagttgcccaaacttgacgttcagtctacccag
gagcagaaatcaaacggttctgacccagaatctcctgtatcacctcttcttacttctgat
cctaaaagtgaacgttctcattctcaaacttttagtcgccctctcagtcatgctggtgac
atcccaatgaaagctaaggaagcgcatcataaggaagctccatctttttggaggttagca
caacttagttttgcagagtggctctatgctgtgttgggaagcattggtgctgcaatcttt
ggctcttttaatccacttcttgcttatgctatcgctctgatagtaacagcatattatagg
cgtcgggaacaaaatgacttacgggatgaagtagacaggtggtgtttgataattgcctgt
atgggtatagtaactgttattgccaactttctgcaacacttctacttcggcattatgggg
gaaaagatgactgaacgggttcgcaggatgatgttctcagcaatgttgcggaatgaagtc
ggatggtttgatgaagaagagaataatgctgacaccttgtccatgcgattggcaaatgat
gctacatttgtacgggccgcttttagcaaccggctttcaatatttgtacaggatagtact
gctgttattgttgctttgctaattgggcttttgctacattggcggttggcacttgtggca
ctcgcaaccctgccaattttaaccgtctccgcttttgcacagaaattatggcttgctgga
ttttctaagggaatccaagagatgcataggaaggcatcgttggtcctcgaggatgcagtg
agaaacatttacactgttgtcgcattttgtgccggtaataaggtaatggagctctacaga
ttgcagctgaagaaaatattgagaaagagcttctttcatggaatggcaataggttttgca
tttggcttttcgcagttccttcttttcgcctgcaacgctcttctcctttggtacaccgct
ctatgtgttaaaagaggctacgtggatctgcctacggctgtcaaggagtacttagttttc
tcttttgccacctttgcactggtggagccatttggattggcaccgtacattctcaagagg
cggaaatctctcgcttcagtgtttgaaattatcgagcgagtccctaaaatcgagccagat
gataactcagcattgaagccacctaatgtatatgggagcatcgagttgaaaaatgttgat
ttctgctatcctacccgtccagaaatgttggtattaagcaattttagtcttaaagttaat
ggcggacagactttagctgtcgttggagtttcaggatctgggaagagtacgataatatct
ctcatcgagagattttacgatccggtcgcaggtcaggttctacttgatgggcgggattta
aaacaatacaatttgaggtggttgaggaatcacttgggtcttgttcaacaggaacccgtc
atcttctcaactactatcaaggaaaacattatatatgcaaggcacaatgctagcgaagcc
gagatgaaagaggccgccagaatagctaatgctcaccatttcatcagcagcttgcctcac
ggttacgacacgcatgtcggtatgaggggtgtggatttgaccccaggacagaaacaaaga
atcgccattgcccgagtggtgctaaagaatgctcccatcttattgttggatgaagctagc
tcatccattgaatccgagtcgagccgagtggtgcaggaggcacttgatacgctgataatg
gggaacaaaactaccattttgatagcccatcgagcagcgatgatgaggcatgttgacaac
attgtggtacttaacggcggtcgaatcgtggaggaagggacacatgattctttggttgcg
aaaaatggcttgtacgttcgtttaatgcaaccacatttcgggaaaggtttgcgtcagcac
cgactggtttaa
DBGET
integrated database retrieval system
