Hibiscus syriacus (Rose-of-Sharon): 120164587
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Entry
120164587 CDS
T09559
Name
(RefSeq) structural maintenance of chromosomes protein 5-like
KO
K22803
structural maintenance of chromosomes protein 5
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120164587
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
120164587
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
Mistic
zf-HYPF
AAA_16
AAA_27
ABC_tran
Motif
Other DBs
NCBI-GeneID:
120164587
NCBI-ProteinID:
XP_039030209
LinkDB
All DBs
Position
Unknown
AA seq
1055 aa
AA seq
DB search
MEEPRVKRPKISRGEDDYLPGNITEIELHNFMTFNHLVCKPGPRLNLVIGPNGSGKSSLV
CAIALCLGGEPQLLGRATRIGAYVKRGEGAGYVKISLRGYTKEEQITIVRKIDTRNKSEW
LYNGKSMAKREILEVIQRFNIQVNNLTQFLPQDRVCEFAKLTPIQLLEETEKAVGDPQLP
VQHCALVEKSHEQKKYQKAVDTMGESLKQLISLNAEQEKDVERVRQRDELLEKVDSMKKK
LPWLKYDMKKTEYLEAQKRGKEAKKKLDEAAKTLIAFKAPIEKQKQEKTKLEDQCKRINN
LMNENIKKRNDLLQKENEAAVHARGKYKEIEDLRREEDFRKQSIIEAKKKLADAEEDLQN
LPAYEPPKEEIERLKSQIVELTSSAQQMMQQKKEKERSLGQMKTDLRNCVDCLRDMENTK
NKRLHALKKSGADKIFDAYQWLEQNRDKLNKEVYGPVLLEVNVSNEVHANFLEGQVAYYI
WKSFITQNSSDRDFLVKNLQPFDVPILNNTREESGRKAPFEISKQMCELGIYSRLDQVFD
APTAVKEVLTSQFALEHSYIGSDKTDKKADDIARGLGILDFWTPQNHYHWSVSRYGDNEM
SARVEPVHDSRLLLCGLDSGEIEKLRSRKNELEKSVADVEEGIKSLQIQQRLVEDEAAKL
QKQREEMVDTARREMKKRKELEICVEQRKRKLSSLVKTGDVEIAVAKLIDQATRSNVERL
KHAIKLKDLLVEAVSCKWSYAEKHMVSIEYDAKIRDSEANLKEHEKFAYQASLNLENCQQ
EVKDYHQQLSAAKRTAESIATLTPELQKLFLEMPTTIEELEAAIQDNISQANSIVFLNQN
ILQEYQDRERQIETISAKLDTDRKELQRCLGEIDALKGNWLPKLRNLVSQINETFSRNFQ
EMAVAGEVSLDEHDNDFDQFGILIKVKFRQSGQLQVLSAHHQSGGERSVSTILYLVSLQD
LTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPNLEYSEACSIL
NIMNGPWIEGPSKVWGNGDCWSLIAGLEETRRQRC
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacctcgcgtcaagcgccccaaaatttcaaggggcgaagatgactatttgcca
ggaaatatcaccgagattgagctccacaattttatgactttcaatcacttggtatgcaaa
cctggacctaggttaaaccttgtcataggaccaaatggttctggtaagagctctcttgta
tgtgctattgcactttgtctcggcggtgaacctcagcttcttgggagggctacaagaatt
ggtgcatatgtgaagcgaggggaaggtgcaggatatgttaagatttctttgaggggctac
actaaggaagagcagatcacaattgtccgtaaaatagatacacgtaacaagtcagagtgg
ttgtacaatggcaaatctatggccaaaagagagatattggaagtcattcaaagattcaac
atccaagtcaacaatttgacacaattcttaccacaagaccgtgtttgcgagtttgcgaaa
ttaactcccattcagctcctagaagagactgaaaaagcagttggtgatcctcaacttcct
gtgcaacattgtgcccttgtagaaaaaagccatgaacaaaaaaaatatcaaaaagctgta
gacacaatgggcgaaagcttgaaacaactgatatcccttaatgctgagcaagaaaaagac
gttgagcgtgttcgccaaagagatgaacttttagaaaaggttgattctatgaaaaagaaa
ttgccttggctgaagtatgatatgaagaagactgaatacttggaagcccaaaagagggga
aaagaggctaagaagaagttggatgaagctgcaaagacactgattgcattcaaggctccc
attgaaaaacagaagcaggagaaaacaaaactggaggatcaatgtaaacgcataaacaat
ctcatgaatgaaaatattaagaaacggaatgatcttctgcagaaagagaatgaggcggca
gtgcatgcacgaggtaaatataaggaaatcgaagatttgaggagagaagaagattttcgc
aaacaaagtattatagaggctaaaaagaaacttgccgatgctgaagaggatcttcagaac
ctgcctgcatatgagcctcctaaggaggaaattgagagattgaaaagtcaaattgtggag
ttaacttcttctgctcagcaaatgatgcagcagaaaaaggagaaagaaagatctcttggt
caaatgaaaacggacctgaggaactgtgtggattgtttgagagatatggagaatactaaa
aacaaacgtctacatgctttaaagaaaagtggcgctgataagatatttgatgcttatcag
tggttggaacagaatcgtgataaattgaacaaggaggtttatggccctgtattgcttgag
gtaaatgtgtcaaatgaggtccatgctaacttcttggaaggtcaagttgcttactacatc
tggaagtctttcatcactcaaaattccagtgatagggattttcttgtaaagaacctacag
ccgtttgatgttcccattctaaataatacaagagaagaatctggtcggaaagcacctttt
gaaatttctaagcagatgtgtgaacttggcatctattcccggcttgaccaggtttttgat
gctcccactgctgtaaaggaggttttgacatcacaatttgctctagagcattcatatatt
gggtcggacaaaactgataagaaggctgatgatattgctagaggattgggaattttagat
ttctggactcctcaaaaccattatcattggtctgtttctagatatggtgataatgaaatg
tcagcacgagtagagcctgttcatgattcacgtcttctactttgtggtttggatagtgga
gaaattgaaaaactgaggtccagaaagaatgagcttgaaaagtctgttgctgatgtggag
gaaggcataaaatcacttcagattcagcaaaggctggttgaagatgaagcagccaaactt
caaaagcagcgggaggagatggttgatacagcaagaagggagatgaaaaaacggaaagaa
ttggaaatctgtgttgaacaacggaaaagaaaattatcatccttggtgaaaactggtgat
gtggaaatagctgtggcgaagctcattgaccaagctacgagatcaaacgttgagcgtctt
aaacatgcaattaaacttaaggatttgctggttgaagctgtttcctgcaaatggagttat
gctgagaaacatatggtttctattgaatatgatgcaaagattagagactcagaagccaat
ctcaaggagcatgagaagtttgcttaccaggcatcattgaacttagagaattgtcaacaa
gaagtaaaggattatcatcaacaactatcagctgccaagagaactgctgaatcaattgcc
acccttactcctgaacttcaaaagttatttcttgagatgccaactacgattgaggagttg
gaggctgctatacaagacaatatttctcaagccaattctattgttttcctaaaccaaaac
atactgcaggaatatcaagatcgtgaacgtcagatagaaaccatttctgcaaaactagac
acagatagaaaggaacttcaaaggtgcttaggcgagatagatgccctgaagggaaattgg
ctcccgaagttgagaaatcttgttagtcagataaatgaaacttttagtcgtaacttccaa
gagatggcagttgctggggaagtttcattggatgagcatgacaatgattttgatcaattt
ggaattcttataaaagtgaagttcaggcaatcaggtcaacttcaagttctcagtgctcac
catcaatctggaggggaacgttcagtttcaactattctttatcttgtttctcttcaagat
ctcactaattgcccctttagagtggttgacgagattaatcaaggaatggaccccatcaat
gaaaggaagatgtttcagcaattagtaagggcggccagccagccaaacaccccacagtgt
ttccttcttaccccaaaattgctaccgaacctagaatacagtgaggcttgtagcattctg
aatataatgaatggaccctggatcgagggaccctctaaagtgtggggaaatggagactgc
tggagcttgattgcagggttagaagaaacacgtcgtcagcgctgctga
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