Hibiscus syriacus (Rose-of-Sharon): 120180856
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Entry
120180856 CDS
T09559
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120180856
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsyr02000
]
120180856
04147 Exosome [BR:
hsyr04147
]
120180856
04090 CD molecules [BR:
hsyr04090
]
120180856
Enzymes [BR:
hsyr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120180856
Transporters [BR:
hsyr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120180856
Exosome [BR:
hsyr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120180856
CD molecules [BR:
hsyr04090
]
Proteins
120180856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
Zeta_toxin
AAA_22
AAA_29
AAA_15
RsgA_GTPase
AAA_5
nSTAND1
APS_kinase
DUF815
DUF87
SbcC_Walker_B
AAA_25
Rad17
ECH_2
DUF5639
DUF1360
Motif
Other DBs
NCBI-GeneID:
120180856
NCBI-ProteinID:
XP_039042073
LinkDB
All DBs
Position
Unknown
AA seq
1353 aa
AA seq
DB search
MSQDLEETKTIEQWKWSEMQGLELVSPPSEPLDKQPEKTQVEAQAYQGSAGERREMESSA
ASSSSEAIKDGSSNGGGGGNGEKVGDVPSVGFCELFRFADGLDYVLMGIGSLGALVHGCS
LPIFLRFFADLVNSFGSNANNIDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGER
QTTKMRIKYLEAALNQDIQYFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFV
SGFVVGFTAVWQLALVTLAVVPLIAVIGAIHTTTLAKLSAKSQEALSQGGNIVEQTVVQI
RVVMAFVGESRALQAYSSALKVAQKLGYKTGFAKGMGLGATYFVVFCCYALLLWYGGYLV
RHHYTNGGLAIATMFAVMIGGLGLGQSAPSMSAFAKAKVAAAKIFRIIDHKPGIDRNSES
GLELESVTGLVELKNVDFAYPSRLDVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIE
RFYDPTSGEVLLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDANQIEIE
EAARVANAHSFIVKLPDGFNTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSAL
DSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVIQRGSVSEIGTHDELISKGEN
GTYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDFST
SDFSLSLEASHPNYRMEKLAFKEQASSFWRLAKMNSPEWVYALVGSIGSVVCGSLSAFFA
YVLSAVLSVYYNPDHAYMRREIGKYCYLLIGLSSAALLFNTLQHSFWDIVGENLTKRVRE
KMLTAVLKNEIAWFDQEENESARISARLALDANNVRSAIGDRISVIVQNTALMLVACTAG
FVLQWRLALILIAVFPVVVAATVLQKMFMKGFSGDLEAAHAKATQLAGEAIANVRTVAAF
NSENKIVGLFSSSLQTPLKRCFWKGQIAGSGFGVAQFSLYASYALGLWYASWLVKHGISD
FSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDTDATQVPN
RLRGEVELKHVDFSYPSRPDVPIFRDLNLRARAGKTLALVGPSGCGKSSVIALIQRFYEP
SSGRVMIDGKDIRKYNLKSLRKHIAIVPQEPCLFASTIYENIAYGHESATEAEIIEAATL
ANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAIARALVRKAELMLLDEATSALDAESE
RSVQEALDRASSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNYPDGCYAR
MIQLQRFTHSQVVGMTSGSSSSAKPKDDNEREA
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagatttggaagagacaaagacgatcgagcaatggaaatggtccgaaatgcaa
ggccttgaacttgtgtctcctccatctgaacctttagataaacaaccggagaaaactcaa
gttgaagctcaagcttatcagggaagtgcaggagagagaagagaaatggaaagctctgca
gcttcttcttcatcggaggccataaaggatgggagcagtaatggtggtggtggtgggaat
ggagagaaagtaggggatgttccttcagttggtttttgtgaactctttagatttgctgat
ggtttggattatgtattgatgggaattgggtcactaggtgctcttgtacacggctgttct
ttgcctatattcctccgtttctttgccgatcttgtcaattcttttggttctaatgctaat
aacatagacaagatgatgcaagaagttttaaagtatgcattttacttccttgtggtgggt
gctgcaatttgggcatcttcatgggcagaaatatcgtgttggatgtggactggagagagg
caaacaacaaagatgaggatcaagtatttagaagcagctttgaatcaggacattcaatac
tttgacactgaggttagaacatctgatgttgtgtttgccatcaacactgatgcagtgatg
gtacaggacgccattagtgagaagttgggcaatttcattcactacatggcaaccttcgtg
tctggttttgtggtgggttttacagcggtatggcaattggctttggttacacttgcagtg
gttcctctcattgctgtgattggagcaatccataccaccacattagccaagctctctgca
aaaagccaagaagctttatctcaaggaggaaatattgtagaacagacggtcgttcaaatt
cgggttgttatggcttttgttggtgagtcaagagcattacaagcctactcttcggcgttg
aaggttgctcaaaagctcggttacaaaaccggattcgcaaagggaatgggattgggagca
acttactttgttgtcttttgttgttatgctcttcttctttggtatggaggttatctggtt
aggcatcattacaccaatggaggacttgccattgccaccatgtttgctgttatgattggt
ggattgggtttgggccagtctgcaccaagcatgtctgcatttgccaaggccaaagtggca
gcggcgaaaatcttccgtataattgatcacaagccagggatcgatagaaacagcgagtct
ggtttggagttggagtcggttactggtttagttgaactgaaaaatgtggattttgcatac
ccatcaaggctagatgtaaggatccttaacaatttctccctaacagttcctgctggaaaa
actatagctttggtgggaagcagtggttcgggtaaaagtacagtcgtctccctcattgag
agattctacgatcccacctcaggagaagttctgctcgacgggcatgacataaagacgtta
aagctgagatggttaaggcaacaaatcggactcgtgagccaagagcctgccctctttgcc
accaccattagagaaaacattcttctgggtaggcccgatgcgaaccaaatcgagatcgaa
gaagctgccagagtggccaatgcacattcattcatcgtaaagcttcctgatggtttcaac
actcaggttggggagagaggacttcaactctcgggtgggcagaagcagagaattgctata
gccagggcaatgttgaagaacccagcaatccttctattggacgaagcaactagtgcacta
gactccgagtcagaaaagctggttcaagaggctcttgatcgtttcatgattggaaggaca
actctcgtaattgcgcatcgactttccactattcgcaaggccgatctcgtagctgtaatc
cagcgggggagtgtttctgaaattggaacacatgatgagctcatttccaaaggagaaaat
ggtacctatgccaagctcatccgaatgcaagaagcggcacacgaaactgcccttaacaat
gctagaaaaagtagtgcaaggccttctagtgccaggaactcagtaagctcaccaattata
acccggaattcatcatatggccggtcaccatattcacggaggctttctgacttttccact
tctgattttagcctttcccttgaggcctcacaccctaattaccgaatggaaaagcttgcc
ttcaaggagcaagctagttccttttggcgccttgcgaaaatgaattctcctgaatgggtt
tatgctttggttggttctataggttccgtcgtttgcggatccctgagtgctttctttgca
tatgttctaagtgctgttctcagtgtctactacaacccggatcatgcttacatgagaaga
gaaattgggaaatactgctatttattgattggactttcatcagctgcccttctctttaac
acactacagcattccttttgggatattgtgggagaaaatctcacaaaacgagtgagagag
aagatgctgacagcagtgctgaaaaatgaaattgcatggtttgatcaagaggaaaacgag
agcgctcggatttccgcaaggctggctcttgatgcgaacaatgtccgatcagctatagga
gaccgtatttcagtgattgtgcagaacacagctctgatgttagtcgcttgcactgccggc
tttgttttgcagtggcgccttgcccttatcctcattgccgtcttccctgtggttgtagca
gcaacagttttgcagaaaatgtttatgaaaggtttctcaggagatttagaagcggctcat
gccaaggctacacaactagctggagaggccatagccaatgtaagaactgttgctgccttc
aattcggagaacaaaattgttggcctattctcttcgagccttcaaactccgttgaagcgc
tgcttctggaagggacaaattgcaggaagcggattcggggtagctcagttttcactatac
gcttcttatgcccttggtctttggtatgcttcctggcttgtgaagcatgggatctctgat
ttttcgaagacaatccgagtatttatggttctcatggtctccgccaatggtgcggctgaa
acattgaccttggctcctgacttcattaagggaggtcgagccatgcgatccgtctttgat
cttcttgaccgtaaaactgagatagagcctgatgacactgatgccacacaagttcctaac
cgcctccgtggggaagtagaactcaagcatgttgacttttcttatccctcacgtcctgat
gtcccaatcttccgtgaccttaatcttcgtgcccgtgctggaaaaactcttgcccttgtt
ggtccgagtggatgtggtaagagctcggtcattgcacttattcagagattctatgagcca
tcatctggtcgtgttatgatcgacggaaaggacattagaaaatacaacctcaaatccttg
agaaaacacattgcaattgttccacaagagccatgcctctttgcttctaccatctatgaa
aacattgcttatggacatgagtcagcaactgaggccgaaatcatcgaggcagctacacta
gccaatgcccacaagttcatatcctcgttgcccgacggttacaaaacatttgtcggggag
agaggagttcaactctccggtggccaaaaacaaagaattgccatcgcaagggctctcgtg
aggaaggcagagcttatgctgctcgatgaggcaacaagtgcccttgatgccgaatccgag
agatccgtccaagaggctctagaccgtgcatcctccgggaaaactacaatcgtggttgct
catcggttgtcaacaatccgtaatgctcatgtcattgcagtgatcgatgacgggaaagtt
gcagagcaaggatcccattcacacttgcttaaaaattatcccgacgggtgttacgcccgc
atgatacagttacaaaggtttacacatagtcaagttgttggaatgacatcaggctcaagt
tcttcggcaaaaccaaaagatgacaatgagagagaagcttag
DBGET
integrated database retrieval system
