Hibiscus syriacus (Rose-of-Sharon): 120192361
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Entry
120192361 CDS
T09559
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120192361
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsyr02000
]
120192361
04147 Exosome [BR:
hsyr04147
]
120192361
04090 CD molecules [BR:
hsyr04090
]
120192361
Enzymes [BR:
hsyr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120192361
Transporters [BR:
hsyr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120192361
Exosome [BR:
hsyr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120192361
CD molecules [BR:
hsyr04090
]
Proteins
120192361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Zeta_toxin
ABC_ATPase
AAA_21
AAA_29
RsgA_GTPase
PRK
AAA_24
DUF4619
SRP54
Motif
Other DBs
NCBI-GeneID:
120192361
NCBI-ProteinID:
XP_039051082
LinkDB
All DBs
Position
Unknown
AA seq
1239 aa
AA seq
DB search
MKKMGSPEKNGFLRENKTRHNIFIIFRYADWVDVLLMVMGTIGAIGDGMSTNWLILFVSR
IMNSLGFGSSHKNSNNFMGEVEKCTLYFTYLGLAGMVVAFMEGYCWSKTSERQVLKIRYK
YLEAILKQEVGFFDSQEATTSEVINSVSKDTSLIQEVLSEKVPLFVMNTTAFISGLAFSA
YLSWRLALVVFPTILLLIIPGILYGKYLLYISKKVSEEYGKANAVVEQALSSIKTVYSFT
AERRIVERYSAILDGAVKLGLKQGIAKGLAVGSTGISFAIWAFVAWYGSHLVMYKGESGG
RVYTAGLCFILGGLALGVALADLKHFTEATVAAASIFARIDRTPQIQSEDTNGIVLPTIR
GDIEFDNVGFVYPSRPDSVVLKHFNLKVEAGKTVALVGASGSGKSTAIALVQRFYDVNNG
AVKIDGVDIRRLQLKWIRGKMGLVSQENALFGTSIRENIMFGKLDATMDEVMAAAMAANA
HNFIRQLPQGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLV
QNALDQASMGRTTLVVAHKLSTIRNANLIAVVDNGCIIEIGSQDDLMNMKNGHYARLAKL
QRQFSCSDHEHNLETRLPSAGRTSTGRLSTAKSSPSPAFFATPMTNIETSKSVSHPPPSF
LRLLSLNSPECRHGLIGSLSAIAFGAVQPVYALTIGGMISAFFATSHQEMQARIRTYALI
FSLLTLLSFILNLIQQYSFAYMGERLTRRIRSRMLEKMLSFEPAWFDEEKNSNGALCSSL
SNQASMVKTLIADRISLLVQTTSAVTIAMIIGLIVAWKLAVVMIAVQPLTIMCFYARKVL
LSSISTNFVKAQNQSTQIAVEAVYNHRIVTSFGSLGKVLQLFDEAQEEPRKEARKKSWLA
GIGMGSAVCLTFMSWALDFWYGGTLVQKGDISAGDVFKTFFILVSTGKVIAEAGSMTADL
AKGSTAVTSIFEILDRQSSIFPGSQGGDGTNGTKLERISGKIELKKVDFAYPSRPDMLVL
RQFSLEVKPGASIGLVGKSGCGKSTVIGLIQRFYDVEMGSVRVDGIDIRGLDIQWYRRQT
ALVCQEPVLYSGTIRDNIVFGKLDASENEVAEASRAANAHEFISALKEGYKTECGERGVQ
LSGGQKQRIAIARAIIRNPRILLLDEATSALDVQSEQVVQEALDRIMMGRTTVVIAHRLN
TIKKVDSIAFVADGKVVERGTYAQLKNQQGAFSKLADVV
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatgggttcaccagagaaaaatgggttcctgagggagaacaaaaccaggcat
aatatattcataattttcagatatgctgattgggttgatgttctgctgatggtaatgggt
accattggagctatcggcgatggaatgtcgaccaactggttaatactcttcgtcagccgt
ataatgaacagcttgggctttggaagttcccacaaaaacagtaacaacttcatgggagag
gtcgaaaagtgcacattatactttacatacttgggattagcaggcatggtggtggctttc
atggaagggtactgttggagcaaaaccagcgagcggcaagtgctgaagatccgttacaag
tatttagaagcaatacttaaacaagaagtcgggttcttcgattcacaggaagcaaccaca
tcggaggtcatcaacagcgtatccaaagacacatctctcatacaagaagtccttagcgag
aaggttccattgtttgtgatgaacacgacggccttcatatcgggcctggcattctcggca
tatctttcatggaggttggctttggttgttttcccgacaattcttttgctgataatccct
ggaatactttatgggaagtaccttttgtatatctcgaagaaggtttccgaggaatatggg
aaggcaaacgccgtagtggagcaggctctgagctcgattaagacggtgtattcattcacg
gcggagaggaggatcgtggagaggtattcggcgatattggatggggcggtgaagttgggg
ttgaagcaagggatagccaaagggttggcagtggggagcacagggatttcttttgccata
tgggcctttgttgcttggtatggaagtcatctggtcatgtataaaggagagagtggtgga
agggtttatactgctggtctctgctttatcttgggaggactggcacttggagtagcacta
gctgatctaaagcacttcacggaagccaccgtcgccgccgccagcatcttcgccaggatc
gaccgtacacctcagatacaaagcgaagacaccaacggcatcgtgctacccacaatccga
ggagacatagagttcgacaacgtcggattcgtgtacccctcacgccccgattccgtagtt
ctcaaacacttcaacctcaaagtcgaagcgggcaaaactgtggcccttgtcggtgcaagc
gggagtggaaaatccaccgccatcgcattggtgcaacggttttacgatgtaaacaacgga
gcggtgaaaatcgatggcgtcgatataagaaggctacaattgaaatggatcagaggaaag
atggggctcgttagccaagaaaatgcattgtttgggacttccataagggaaaatataatg
ttcgggaagctagatgctaccatggatgaagtaatggctgctgccatggctgctaatgct
cataatttcattagacagcttcctcaaggttatgaaacaaagattggggaaaggggagca
ctgttgtcaggaggacaaaagcagcgtatcgccattgctagagccattataaagaaccct
gtgatactgctacttgatgaggcgacgagtgcccttgattctgaatcggaaacactggta
caaaatgcacttgatcaggcctccatgggaagaaccactctggtcgttgcccacaagctc
tccactattcgaaatgcaaacctcattgctgttgttgacaatggttgcatcattgaaatc
ggatcccaagatgacctcatgaacatgaagaacggtcactatgcacggctcgccaagcta
caacgacaattcagctgcagcgaccatgaacacaatctcgaaacacgccttccgtctgct
ggaagaacgagtaccggcaggctaagcactgcaaaatcgagcccgagtccggctttcttt
gctacaccaatgactaatatagaaacttctaaatcggtatctcatccccctccttccttc
cttaggctcctctctttaaattcgccggaatgtagacatggtttgattggtagcctctcg
gcgatagctttcggagccgttcaacccgtctatgctttaacaatcggtggcatgatttcg
gcatttttcgcgacaagtcaccaagaaatgcaggctcggatacgtacttatgctttgata
ttttctttgctcacgttgctctccttcattttgaatcttattcagcagtatagttttgct
tacatgggtgagcggttaactaggagaattcgaagtagaatgctagagaaaatgctttcc
ttcgaacctgcttggtttgatgaagaaaaaaactccaatggagctttatgttcgagtttg
agcaatcaggcatcgatggttaagactctcatagcggaccgaatctcgttgttagttcaa
actacttctgccgttaccatcgcgatgattatcggactaatcgtggcatggaaattagca
gtagtgatgattgcagtccaacctcttacaatcatgtgtttctacgcacggaaagttttg
ctttccagcatttcaacaaacttcgtcaaggcacaaaatcaaagcactcaaatagcagtg
gaagccgtttataatcatcgaatagtaacttcgttcgggagcctcggtaaggttcttcaa
cttttcgacgaggcacaagaggaaccgaggaaagaggctaggaaaaaatcatggctcgca
gggattggtatggggtcagctgtttgcttaacctttatgtcgtgggctttagatttttgg
tatggaggtacactggttcaaaagggagatatatcagcaggggatgtgtttaagaccttc
tttatcttagttagcaccggaaaggtcatagctgaagccggaagcatgaccgccgatcta
gccaagggatcaactgcggtgacatccatattcgagatccttgatcggcaatcctcgatt
tttccaggatctcaaggaggagatggcaccaatggaacaaagctagaaagaataagtgga
aagatagagttgaagaaggttgattttgcatatccaagcaggccggatatgctcgtgttg
cgccaatttagcttggaggtgaaaccgggtgcgagcattggactagtcgggaaaagcgga
tgtggaaaatcaactgtgattggattaatacaaagattttacgatgtcgaaatggggtcg
gtgagagtagacggtatagacataagaggactagacatccaatggtacaggaggcaaacg
gcattggtctgccaagagccagtgttatattcaggcaccatccgggataacattgtgttt
ggaaagctcgatgcatctgagaacgaagttgcggaagcatctagagctgcaaatgctcat
gaattcatctcagcattgaaggaaggatataaaacagaatgcggagaaagaggagtgcaa
ctatcaggaggacagaaacaaagaatagccattgcaagagctataattcggaacccaagg
atactcttactagacgaggcgactagcgctctggacgtgcaatctgaacaagtagtccaa
gaagctttggatcgaatcatgatgggaaggaccaccgttgtgatcgcccatcggcttaac
acaataaaaaaagttgattcaatcgcatttgtggccgatggaaaggtggtggagcgaggt
acctatgcccagctcaagaaccagcaaggagcattttccaagcttgcagacgtggtataa
DBGET
integrated database retrieval system
