Hibiscus syriacus (Rose-of-Sharon): 120202881
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Entry
120202881 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 8-like
KO
K20305
trafficking protein particle complex subunit 8
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120202881
Membrane trafficking [BR:
hsyr04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
120202881
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
Gryzun
SNAP
Motif
Other DBs
NCBI-GeneID:
120202881
NCBI-ProteinID:
XP_039059163
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All DBs
Position
Unknown
AA seq
1288 aa
AA seq
DB search
MADPANTPLGKMLLEEIAPVVMVLCTPLVEQSCLKNGISFVQMLSPFCDFTNIDVPVRTS
SDQPYRLRKFKLRLFYSSDIRQPDLEVAKERLKQVITRAGEKFFLESSEPSQINDLLSRP
ESEILPSWFQFFNKELVRTLSFSDHEAFDHPVACLLVVSSKDDEPINRFVDLFNTSKLPS
LLNDGAMDPKILKHYLLVHDDQDGPLDKATKLLSEMRNAFGQNDCQIININSSQDGQIHH
EDNPWAPFKPDALPTENLGGFLDLDDLNEIKDFLLELSSKHIIPYMEQKIRVLNQEVSAT
RKGFRNQIKNLWWRKGKDDTVVTANGPVYTFKSIESQIRILGDYAFMLGDYELALSNYRL
ISTDYKIDKAWKRYAGVQEMMGLTYFMLDQSRKDAEYCMENAFNTYLKLGSAGRQNATRC
GLWWVEMLKTRDQVKEAATVYFRICGEDTLHSAVLLEQASFCYLLSKPPMLHKYGFHLVL
SGDHYKKCDQIKHAIRTYRSVIPVYKETSWSLIKDHVHFHTGQWYALLGMYDVAVTHMLE
VLASAHQSKAKQELFLRDFLQIVQKTGKTFEVVKLQLPVINISTLKVIFEDHRTNASAEA
ASVRESVWRSLEEDIIPSFSTSKSNWLDLQSKVIPRKYKESNICVAGEAIKVDIEFRNPL
QIPISVSSVSLTCELSANPEEDANSSNIELQNNESKTSTSTGDINSSLILSEVDFSLEGG
ETTLVQLTVTPRIEGILKIVGVKWKLSSSVVGLCDFESSHANRRVVKGRKKAKHSPSNDL
KFLVIKSTPRLEGFIHSLPEKTYAGDLRLLVLELSNQSKFPIKNLKMKISNPRFLYAGNQ
RELNVDFPACLKKMNVEKSSGHTNGNKMSQNVFHFPEDISVQEKTSLSWPLWFHAAVPGN
IPLYITIYYEMEGVSSIMKYRTLRMHYNLRVLPSMDVSFELSSRPSRSIEFLLRMDVVNK
TSSECFQVHQLSSVGQQWEISLLQPVDSILPSQSLFAGQSFSCFFMLKDRRRSATSEDCT
PLSRIQSDVRLGPQDINEAPFDVSSSPLADFHDCERSCQGMSSQAYESKVDFVFITQLPE
GTIDSAAPNTPLVFSYHACDCSLSSMNPISWIVDGPRTIQHNFSAPLCEVNLKMTITNSS
NSVASVHINTFDSPSSNSQPINDAAASQPPENQAGWSDIPIVSDTKIITNDALATRSSKS
LSIESAPQFIWSGSSSTKLTLQPKSTAEIPLQICAFAPGVYDLSNYVLNWNLTPINDQVN
QGEASKSSGSCQGYPYYLTVLESTRKGS
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccggccaacacgccacttggtaaaatgctattggaggagatcgctcctgtt
gttatggtactctgcactccacttgtggaacaatcttgcctcaagaacggaatatccttt
gtccagatgctttcccctttctgcgacttcacaaacattgacgtgcctgtacgaacgtcg
agtgatcaaccctacaggctgcggaagttcaaattgcgcttgttttactcctcggatatt
cggcagccggatctcgaggtagcaaaagagaggctaaagcaggttattacccgtgcggga
gagaaattttttcttgaatcttcagaaccatctcaaattaacgatcttctctctaggcct
gaatctgaaattttaccatcgtggtttcagttttttaacaaagagcttgtacgtacattg
tctttttcagatcatgaagcttttgaccatcccgtggcatgccttttggttgtgtcctcg
aaggatgatgaacctataaacagatttgtagacctctttaacaccagcaaattgccctct
cttctcaatgatggtgcaatggacccaaagattttgaagcattacttacttgtgcatgat
gatcaagacggtcctttagataaggctactaagcttttgtctgagatgagaaatgcattt
ggccaaaatgactgtcaaataattaacattaattcttctcaagatgggcaaatccatcat
gaagataacccttgggctccatttaaacctgatgctttacctactgaaaatcttggtggt
ttcctcgatcttgatgacttgaatgagataaaggattttttgctagaattatcatctaaa
catatcattccttacatggaacaaaagatacgtgtgttgaaccaagaggtttctgcaaca
agaaaaggttttaggaaccaaattaagaacttgtggtggaggaaggggaaagatgatact
gtagttaccgctaatggtcctgtgtatacctttaagtcaattgaatctcagattagaatt
ttaggtgactatgcattcatgttaggggactatgaacttgcactatcgaattatcgccta
atttccactgattacaagattgataaagcctggaagcgctatgctggtgtgcaggagatg
atgggacttacctacttcatgcttgatcaatcaagaaaagatgcggagtattgcatggaa
aatgcatttaatacttatttaaaacttggatctgctggtcgacaaaatgctaccagatgt
ggtctttggtgggtagagatgctgaagacaagagaccaggttaaagaagcagccactgtt
tatttccgcatttgtggcgaggatactttacattcggctgtgttgcttgagcaagcatct
ttttgctacttgttatcaaaaccaccaatgttgcataaatatgggtttcatcttgttctc
tctggtgatcattacaaaaaatgtgatcagattaaacatgcgattcgcacatatagaagt
gttatccctgtttataaggaaacctcttggagtcttattaaagatcatgttcatttccac
actggacagtggtatgctttacttggcatgtatgatgttgctgtcactcatatgctggaa
gtcttggccagcgctcatcagtcgaaggcaaagcaggagctgtttctgagagattttctt
cagattgtccagaaaactgggaagacatttgaggtagtgaaacttcagttgcctgttatc
aacatttccacccttaaggtcatttttgaagatcatagaactaatgcctctgctgaagct
gctagtgtcagagaaagtgtatggcgttcactggaggaggacataatcccatcattctct
acttccaagtccaactggctggacttacaatcaaaggttataccacggaagtataaagaa
tcaaatatttgtgtggcaggagaagcaataaaagtggatattgaatttagaaaccctctg
caaatccctatttctgtctcaagtgtttctttgacgtgtgagctctctgcaaatcccgaa
gaagatgctaatagttcaaacattgagctccagaataatgaaagcaaaacatcaacctcc
actggggatattaattcgtctttgattttatctgaggtcgacttttcattagaagggggt
gaaacaaccttggtgcaactaactgttacaccaagaatagaaggaattttgaaaatagtt
ggtgtgaaatggaaattgtcaagttcggtagtaggtttatgtgattttgagtctagccat
gcaaacagaagagttgtcaagggaagaaagaaggctaagcattctcctagcaatgatttg
aagtttctagtgattaagagtacaccaagacttgagggttttattcattctttaccagaa
aaaacctacgcgggagacttgcggcttctcgtgttggaactaagtaaccaatctaagttt
cctatcaagaacctaaagatgaagatcagcaatcccagatttctatatgctgggaatcaa
agggagttgaatgtagactttcctgcttgcttaaaaaagatgaatgttgagaaaagcagt
gggcatactaatggtaataaaatgtcgcagaatgtgtttcactttcctgaggatatatca
gtgcaggagaaaacatcattatcatggccactttggtttcatgctgctgttcccggaaat
attcctttgtacattacaatatattacgaaatggaaggtgtatcaagcatcatgaaatat
cgcactctacgcatgcattataatttgcgggttttaccatcaatggatgtatcatttgaa
cttagttctcgcccatcaagatcaatagagttcctcttgcgcatggatgttgtcaacaag
accagttccgaatgcttccaggttcatcagttgtcatctgttgggcagcagtgggagatc
tcattgcttcaacctgttgatagcatcttaccttctcaatctttatttgctggtcaatca
ttctcatgtttcttcatgcttaaggatcgcaggaggtcagcaacttctgaagattgtaca
cctctttcccgtattcaaagtgatgtaagattgggacctcaggatatcaatgaagccccc
tttgatgtatcgagttcgcctttggctgatttccatgactgtgaaagatcatgccaggga
atgtcatctcaggcgtatgaatctaaagttgatttcgttttcatcactcaactgccggag
ggtactattgattccgctgctcctaatacaccgcttgtcttttcctatcatgcttgtgat
tgcagtctttctagcatgaatccaatatcatggatagtcgatggacctcgtaccattcaa
cataacttctcggctcctttatgtgaagtaaatttgaagatgactataaccaactcctcc
aattcagttgcatctgtccatatcaacacattcgattcccccagtagtaacagccaaccc
ataaacgacgctgctgcatctcagcctccagaaaaccaagcaggatggtcggatatcccc
atcgtcagtgatacaaagatcatcactaacgatgcccttgcaacacgttcttccaagtca
ttgtccattgaaagtgccccccagttcatatggtcagggtcgagctccactaaactcaca
cttcaacctaagtcgactgccgaaattcctcttcagatttgcgctttcgctccgggggta
tacgacctgtcaaactacgtcttgaactggaatcttacacccatcaacgaccaagtaaac
caaggagaagcgagcaagtcgtccggatcctgccaagggtatccctattaccttactgtg
ctcgaatctactcgaaagggtagttaa
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integrated database retrieval system
