Hibiscus syriacus (Rose-of-Sharon): 120211837
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Entry
120211837 CDS
T09559
Name
(RefSeq) probable RNA-dependent RNA polymerase 5
KO
K11699
RNA-dependent RNA polymerase [EC:
2.7.7.48
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120211837
Enzymes [BR:
hsyr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.48 RNA-directed RNA polymerase
120211837
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
120211837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RdRP
Motif
Other DBs
NCBI-GeneID:
120211837
NCBI-ProteinID:
XP_039066231
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MENSSNEDVVLPPSVEALISRICDEQKQQPLPNSTKQELAERGEEESLKLLKIIQRSRIN
TTFDRYLKFLMRNSNSPFPLNSSPFSSPDKSWRLMMSSPADLAGGTSDVASSSAPVTPIK
SSSASAGRGEGFSPQLEALGELEFRKAFLILSYIGQNRLEQVITAEEIRSYKNLAMGLFE
KKVWGSLGQLYAAADRVKQLEWGSDKTYEYQCHVCENGSYRFKGPYFERTRSHLQRVLGD
DNVLSVKFEKDGKSSVGSDFPEFKRIGKEGILVGLRRYRFFVFKDGGKAAKKKDPSTSSV
KCFFVRFESNASIDQGKEYILSGKTVKEARSLFMHVHNLESMAKYMARFSLILSKTMKLD
VDFDSLRFDEREDIPCTGEGFEKNGKDRIHTNGTGFISEDLALKCPKNVFKGSITNGANN
EIRTIGASMGESPDTKSTESHRGVPPLLLQIRFFYNGRAIKGTLLVNKKLPPRTIQVRES
MIKVRPDPSKNRTINSLELVTTSNKPKGTNLNRNLIMLLSHGGVPDDFFMDILKNGLEES
ERGFSNKRTALKVALNRGGMDELGVAKMILAGIPLDESYLQYRMSIMLNEDRKNLLEGKL
PITGSYYLMGTVDPSKTLKRGEVSIILENGQISGKVLVYRAPGEHFGDVHVLNARYVDKL
NEYVGHAKYAIFFPCDGPRSLADEMAGGDFDGDMFFVSQNPQLLDYFKASEPWEEECSTP
EGPSPNPSKLSDEELESELFNSFLKARFQQSYAMSEAANSWIAIMDRFLTVKDPSERTLM
KKNLESLINLYYEALDASKTGKKVVIPEDLIAPVFPHYMERYNSFKSTSIMGKIYDYVKS
YQDQVSKRTKTEVRKLPCFDDGVLEEECREKWTALYEEYRKDMSDAQKFPSKEQIDAACN
AVYDKYKKELYGGLELEERQRPMDEIRKEAVAIYNICYDYAMNIDEVGRCGFAWKVAGSA
LLNLYTEQLGESTLSCAPSVLKELFS
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacagctctaatgaagatgtcgttttacctccgagtgtcgaagcattaatatca
agaatttgcgacgagcaaaaacaacagccactccccaactcaacgaagcaggaactggcc
gagagaggcgaagaagaatcgttaaagcttcttaaaataatccagcgttctaggattaat
actacatttgatcgatacttaaagtttttgatgagaaactcaaacagtccttttccattg
aactccagccccttctcttctcctgataaatcatggcgtcttatgatgagctctccagct
gatttagcgggaggtacttctgatgttgcttctagttcggcaccagttacccctataaag
agttcttcagcaagcgctggcagaggagaagggtttagcccccagttggaagctttaggg
gagcttgaatttcgtaaagcttttctaattttaagctatatcgggcagaataggctagaa
caagtaatcactgctgaagaaattcgaagttacaagaatttggcgatgggtctatttgag
aaaaaagtctggggttctctgggtcaactttatgctgctgctgatcgtgtaaagcaactc
gagtggggatcggataagacctatgaatatcagtgtcatgtatgtgaaaatggaagctat
aggttcaagggcccttattttgaaaggactagaagtcatttacaaagagttttaggagat
gataacgttctttctgttaagtttgaaaaagatggtaaaagttcagttggcagtgatttt
ccggagttcaagagaattggaaaagaaggaattcttgttggtttgcgccgttaccggttt
ttcgtctttaaggatggaggcaaagcagcaaaaaagaaagatccaagtacttcatctgtt
aagtgcttttttgttcgattcgagtctaatgcgtccatcgatcaagggaaagaatacatt
ttatctggcaaaacagttaaagaagccagaagtctgtttatgcatgtccataacctggaa
agcatggccaagtatatggccagattttcactaatactctcgaagaccatgaagttggac
gttgattttgacagtctacgttttgatgagagagaagatataccctgcacgggtgaagga
tttgagaaaaatggaaaagatcgtattcacactaatggaactggatttatatccgaggat
ttggcgttgaaatgcccgaaaaacgtcttcaaaggaagcatcaccaatggtgccaacaat
gagattcgaacaattggtgcatcgatgggggaatctccagacacgaaatcgacagaatct
caccgtggggtaccgcctttgctgctccagatccgcttcttttacaatggtcgtgctatc
aagggaactttactagttaataagaagcttccaccccgaaccattcaagttcgggaatcc
atgattaaagttcgacctgatccatcaaagaaccgcacgataaattcactggaattagtt
accaccagcaataaaccaaagggaactaatcttaataggaatttgattatgctccttagc
catgggggtgtcccggatgatttttttatggatatattgaagaatggtttagaagagtca
gagcgcggtttctcgaacaaaagaacagcccttaaagttgctcttaaccgtggaggaatg
gacgaacttggtgtggcgaaaatgattctagcagggattccccttgatgaatcgtatttg
caatatcgaatgtccataatgttgaatgaagatagaaagaatctccttgaaggaaaacta
cctataactgggtcctattatttaatgggcactgttgatccatctaaaaccttgaaacgt
ggtgaagtcagcattatcttggaaaatggacagatttctggtaaagtgcttgtgtaccgt
gcacccggagaacattttggagatgtacatgtgctcaatgcgagatatgtggataagttg
aatgaatatgtaggacatgccaagtatgccatattctttccttgtgatggcccgcgctct
ttggctgatgagatggctgggggtgattttgacggcgacatgttcttcgtatcacaaaat
ccacagcttttggattacttcaaagctagtgagccctgggaagaagaatgctctactccc
gaagggcccagtccgaatcccagcaagctttcggatgaggagttggagagtgagctcttc
aattcgttcttgaaagctaggttccagcaaagttatgctatgagtgaggctgctaatagt
tggatcgcgataatggatcggtttcttacggtaaaagatccatccgagagaactctcatg
aagaagaacctggaaagccttattaacttatactacgaagctttggacgcttcaaagaca
ggaaagaaggtcgtcattccagaggacttgatagcaccagtgtttccacattacatggaa
cggtataactcattcaagtcaacttccatcatggggaagatttatgattatgtcaaatct
tatcaagaccaagtgtccaagaggaccaagacggaagttcgaaagctcccctgcttcgac
gacggagtcctagaggaagaatgccgagaaaaatggaccgcactttacgaggaatacagg
aaagacatgtcagatgctcaaaagttcccgagcaaagaacaaatagatgcagcttgtaat
gcagtttatgacaagtacaagaaggaactatacggaggtttggagttggaggagaggcaa
aggccgatggacgaaatccgaaaggaggctgttgccatttataacatttgctatgactat
gccatgaacatagatgaagtgggcagatgcgggttcgcatggaaagttgcaggctcggcc
ctcttaaatctgtacactgagcagctgggtgaaagtactctctcgtgtgcaccttctgta
ctgaaagaactcttttcttga
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