Hibiscus syriacus (Rose-of-Sharon): 120218577
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Entry
120218577 CDS
T09559
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120218577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120218577
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120218577
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120218577
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120218577
PBAF complex
120218577
GBAF(ncBAF) complex
120218577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ArfGap
Zn_ribbon_2
ZZ
Motif
Other DBs
NCBI-GeneID:
120218577
NCBI-ProteinID:
XP_039071438
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MPASSSDGRGRWKRRKRERRSKHQLEEKDVVLEEEEENNNDDIENSGDDVGVATTHLSLA
GSSESEVLADGRVRIAEFPSVVKRTVNRPHSSVMAIVSSERAGLIGDSKGHQQAELAVLE
NVSHGQLQAVSMESPDPEKYVFTPPPIMEGRGVVRRFGSRVHALPMHSDWFLPSTVHRIE
RQVVPLFFSGKSLEHTPEKYIECRNQIVVKYMDKPEKRITVSDCQRLVNGISDEDLTRIF
RFLDHWGIINYCAAAPSHEPWKVGSYFREDSNGEVHVPSDAIKSVDSLIKFDNPKCRLKA
ADVYSPLSCHDNDASDLDNRIRERLSENYCSSCSQPTPTSYYLSQKEVDTLLCSDCFHDG
RFISGHSSIDFVRVESTKDYGDLDGESWSDQETLLLLEAMEIYNDNWNEIAEHVRTKSKA
QCILHFLRLPMAEGQLEDMEVPSMPKSVIVSNGDGSGRLHSSMNRRLPGPNLQDVDSESR
LPFTNSGNPVMAMVAFLASAVGPRVAAVCAHASLATLSEGENTAKHRSFDQNEAEVHPLP
EEKVKAAAKAGLAAASMKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFTEIETLLM
KECEQVEKTRQRFTAERTRIVATRFGPAGVTSQMSQTGVASPMANNNISNNGQQVLSSSP
SYPSISGYGNQSVHPHLSFMQHQQMLPMGPRLPLTAMQASTSASPNTMFNSLGNTQPTIN
HPLMRSVSRTSF
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcttcttcttcagatggtcgaggtcgatggaaacggcggaagcgagagcggaga
tcgaagcaccagttggaagaaaaggatgtggttctagaggaggaggaagagaataacaac
gatgacattgagaactccggggacgatgtcggcgtagcgactacgcatctatctttggcg
ggttccagcgagagtgaagtccttgccgacggtagagttcgcatcgcggagttcccctcc
gtggtgaagaggacggtgaaccgtcctcacagttccgtgatggcgatcgtgtcgtctgaa
cgggcgggtttgattggggatagcaagggacatcagcaggctgagctggcggttttggag
aatgtttcgcacgggcagttacaggcggtttcgatggaatcccccgatccggagaagtat
gtgtttacccctcctcctataatggaggggcgtggtgttgttaggaggtttgggagtagg
gttcatgccctgccaatgcattcagactggtttttgccatccaccgtgcatcgaatagaa
agacaagttgtgccacttttcttctccgggaaatcactagaacatacgccagagaaatat
attgaatgcagaaaccaaattgttgtcaaatacatggataaaccagagaagagaattaca
gtttctgattgtcagcggttggtaaatggtatcagtgatgaggatttaactcgaattttt
cggtttcttgatcattggggaattatcaattattgtgcagctgctccaagtcatgagcca
tggaaagttggatcctacttcagggaggattcaaatggcgaggttcatgttccatcagat
gctataaagtctgttgatagtttgatcaaatttgacaatcccaaatgtaggcttaaggca
gcagatgtttattccccattgtcatgtcatgataatgatgcctctgacttggacaacaga
atacgagagcgcttatctgaaaactattgcagttcttgttcacagcctactcccacttca
tattatctgtctcaaaaggaggttgatacacttctttgctctgattgcttccatgatggg
agatttatttctggtcactcaagcatagattttgttagggtagagtcaacaaaagattat
ggtgacctagatggagaaagttggagtgatcaggaaacactattgctgcttgaggcaatg
gaaatttacaatgacaactggaatgaaatagctgagcatgttcgtactaagtcaaaagca
cagtgcatacttcattttttacgcctacccatggctgagggccaattggaagatatggaa
gtccctagcatgcccaaatcagtgattgtttcaaatggagatggcagtggaagattgcac
tcaagtatgaacaggagactaccaggacccaaccttcaagacgtagattctgaaagcagg
cttccttttacaaattctgggaatccagtaatggctatggttgcttttctggcctctgct
gttgggcccagagttgctgcagtttgtgcccatgcgtccttggcaactttgtctgaaggt
gaaaacacagcaaagcatcgttcatttgatcaaaacgaggcagaggttcatccactacca
gaagaaaaggttaaagctgctgccaaagctggtcttgcagctgcatctatgaaggcaaaa
ctatttgcagatcatgaggaacgagaaattcaaagattgtcagctaatatcataaaccat
cagttgaagagattggagctgaagctgaagcagtttacagaaatagaaaccttactcatg
aaagaatgtgaacaagtggagaaaacaaggcaaaggtttactgctgagaggacccgaatt
gtagcgacacgatttgggcctgccggggtcacttcacaaatgagtcaaacaggtgttgct
tctcctatggctaacaataacatcagcaacaacgggcaacaggtattgtcatcctcacct
tcatatccaagcatttctggatatggcaaccaatccgtacatccccatctgtctttcatg
caacatcaacagatgcttccaatgggcccaaggttgccgcttacagccatgcaggcatcc
acttcggcttctccgaataccatgtttaactccctggggaatacgcaaccaactattaac
catcctctaatgaggtcagtctctcggactagcttttag
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