Hibiscus syriacus (Rose-of-Sharon): 120219530
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Entry
120219530 CDS
T09559
Name
(RefSeq) DNA topoisomerase 1 alpha-like isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsyr03032
]
120219530
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
120219530
DNA replication proteins [BR:
hsyr03032
]
Eukaryotic type
DNA Topoisomerases
120219530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
DUF896
Cyc-maltodext_C
Motif
Other DBs
NCBI-GeneID:
120219530
NCBI-ProteinID:
XP_039072277
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MAVEAPAKHVYDFDDDDDDGPVVFKRNNASSSKQNQFNSEVKKTLSQRSDGQSGRQASDA
RALNGQSSGSQIKSIPPSKSPPVRSPILNPKSSNSSVKASPVRSPVMNSNASTSLNDQSK
QATKQNKFTAVKEEKSPIKTTETNTDSDDDDDSQPLSARLKGISSQGNKGANTSTPAQSQ
RLVPRIEIKKSAEDPDDEAPLSARFKMKSNTETLSSKPYESHEKKPMASKIRQNGSTMKD
KQQKSSELSDKRPLDKGNSSDQSCAKKPKISDTPTTMKSKQVTVKAEKAEEDDDHIPISQ
RIKKSVSSNSKTSSMKQKATKVVSSSFKKTNKKSKKDMKNSNYSKSTKLSPSSGDGQKKW
STLVHNGVIFPPTYKPHGVMMLYNGRPIDLTSEQEEVATMFAVMKDTDYMSKPQFKKNFW
EDWSKILGKNHIIKSLEKCDFTPIYEWHLQEKEKKKQMSSEEKKALKEEKMKQEEKYMWA
IVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPCDITINIGKDAPIPECSIPGER
WKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRLLKDYIKNIRA
AYTKDFTAKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKL
KFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKTDDLFDELDTSKLNAHLKELMPGLT
AKVFRTYNASITLDDMLNKETKDGDVAEKVVIYQRANKEVAIICNHQRSISKSHSAQMSR
LTEKITELKDVLKELKTDLDRAKKGKPPLKDADGKQKRNLTPEAIQKKIAQTNAKIEKME
RDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDF
RF
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgaggctcctgccaaacatgtttacgattttgatgatgatgatgacgatggg
cccgtagtgttcaagaggaataatgcctcgtcctctaagcaaaatcagtttaactcagaa
gtaaagaagacattgtctcaaaggtctgatggacaatctgggaggcaggcctctgatgca
agagctctcaatggtcaaagttccggttcccagatcaagtccatcccaccttccaagtca
cctcccgtgcgatcacctattttgaacccaaaatcatcaaattcatctgtgaaggcatca
ccagtgaggtcaccagtaatgaattctaacgcatccacttcactaaatgatcagtcaaaa
caagcaacgaagcagaataagtttactgctgtcaaggaagagaaaagcccaattaaaacc
actgaaacaaacaccgacagtgacgatgatgatgattcacaacctttgagtgcaaggctt
aagggtatctcaagccagggcaacaaaggggcaaacacttcaactcctgcccaatcacag
cgattggtaccaaggatcgagataaaaaaatctgctgaagatcctgatgatgaagctcct
ttgtctgcaaggttcaaaatgaagtcgaatacagagacattgagtagtaagccgtatgaa
tctcatgagaagaaacctatggcttctaaaattcggcagaatggttctaccatgaaagac
aagcagcaaaagtcttctgagttgtcggataagagacctcttgataagggcaattcatca
gatcagtcttgtgctaaaaagccaaagatttcagatacacctacaacaatgaaatccaag
caagttacagtgaaagcagaaaaagctgaagaagatgatgaccatattccaatttcccag
cggataaaaaagtcagtttcatcaaacagtaaaacatcatccatgaagcaaaaagcgacc
aaagttgtctcttcatcatttaaaaagacgaataaaaaatcgaagaaagatatgaaaaat
tctaattatagtaagtcaacaaagctgtcacctagttctggtgatggtcagaaaaagtgg
agtaccttggttcacaatggtgtcattttcccacctacatacaagcctcatggggttatg
atgctgtacaatggacgaccaattgatctcacttctgagcaagaggaggtggcaacaatg
tttgctgtaatgaaagatacagattacatgagtaagccacagttcaagaagaatttctgg
gaggactggagtaagatactggggaaaaaccatatcattaagagtttggaaaaatgtgat
ttcactccaatatacgagtggcatctgcaggagaaagagaagaagaagcaaatgagttct
gaagaaaagaaggctctgaaagaagaaaagatgaagcaggaggaaaagtatatgtgggct
attgttgatggtgtcaaagagaaggtaggaaatttcagagtcgaaccacctgggcttttc
cgaggtcgaggggagcatccaaagatgggaaagttgaaaaggcgtattcgtccatgtgac
attaccattaatatcggaaaggatgccccaattccagaatgctcaatccctggtgaaaga
tggaaagatataaaacacgacaatactgttacatggttagctttctggaatgatcccatt
aatccgaaagaattcaaatatgtatttttggcagccagtagttctttgaaggggcaaagt
gacaaggagaaatacgagaaatcaaggctgctgaaagattatatcaagaacatcagggca
gcatatactaaggattttacggcgaaagatgttacaaagagacaaattgctgttgctaca
tatcttattgataaattagctcttagggctggtaatgagaaggatgacgatgaagctgat
actgtaggttgctgcacgcttaaagtaggaaatgtggaatgtattcctccaaataagttg
aagtttgacttcctcggtaaagattcaattcagtatgtgaacacagtagaagttgagctt
cctgtgtacaaggcaatagggcagtttcaaactgggaaaagcaaaactgatgatcttttt
gatgagcttgatacaagcaaactaaatgctcatctgaaggaactcatgcctggtcttaca
gcaaaagtcttccgtacctataatgcttccattacattggatgatatgttaaataaagaa
accaaagatggggatgtggcagagaaagtagtaatttatcagcgagcaaacaaagaggtt
gccatcatttgtaatcatcaacgtagtatctcgaaatctcatagtgcacagatgtcaagg
ttgactgagaaaataacagaactcaaggatgttctaaaagagctaaaaactgatttggat
agagctaagaaagggaagccgccattgaaggatgctgatgggaagcagaagagaaacttg
acccctgaagcgatacagaaaaagattgcacaaacaaatgcaaagatcgagaagatggaa
cgggacatgcaaactaaggaggatctgaaaactgtggcattgggcacatccaaaatcaat
taccttgaccctaggatcacggttgcatggtgcaagcggcacgaagttcccatcgagaag
attttcaacaagtctcttctggcaaagtttgcttgggcaatggatgtggatcccgatttc
agattttga
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