Herbaspirillum seropedicae Z67: ACP92_23440
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Entry
ACP92_23440 CDS
T04519
Name
(GenBank) 3-methylcrotonyl-CoA carboxylase
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
hsz
Herbaspirillum seropedicae Z67
Pathway
hsz00280
Valine, leucine and isoleucine degradation
hsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsz00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
ACP92_23440
Enzymes [BR:
hsz01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
ACP92_23440
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
HlyD_3
ATP-grasp_3
MCC_alpha_BT
GARS_A
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
AKN67912
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Position
5376800..5378815
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AA seq
671 aa
AA seq
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MFTKILIANRGEIACRVAATARRLGIATVAVYSDADARAKHVAACDESVRLGPAPARESY
LCAEKIIAAALATGAQAIHPGYGFLSENAGFAQACAQAGLVFIGPPASAIEAMGSKAAAK
ALMEQAAVPLVPGYHGEEQESGLLHSQADRIGYPVLLKASAGGGGKGMRVVERSEDFDAA
LASCKREAIASFGDDRVLVEKYLTRPRHIEIQVFADGHGHCVYLFERDCSVQRRHQKVLE
EAPAPGMSEERRAAMGEAAVAAARAVGYVGAGTVEFIANQDGSFYFMEMNTRLQVEHPVT
EMITGLDLVEWQLRVAAGQALPLKQEQLRIHGHAIEARIYAENPEKGFLPAIGTLTRMRS
AAAVEFRLGQSAPGDPAHVRIDAGVREGDAISPFYDPMIAKLIVWGPDRDAALRNMQRAL
AQYQVVGLATNIAFLQRLVAGQAFSTAALDTGLIERHRDTLFPPPSSPDTETLALAIAAI
LQQEHAQAERSDPWSQRNGWRLNTRLLRTLRFEHDAGDTTVQLDYAGDGQHWSLLTNGQT
HALQLHAADGDTLIISLDGRTLRADVLREGEWLHVFDAHGQHSLRHVDPLAHAGHSEAEG
GRLTAPMPGKIVALLVQKGASVAHGTPLLIMEAMKMEHTIAAPADGVVEDLLYAVGDQVA
EGAQLLEFKAA
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccaagatcctgatcgccaatcgcggcgaaatcgcctgccgcgtggcagccacc
gcacgtcgcctgggcattgccacggtagccgtctattccgatgccgacgcccgcgccaag
cacgtggccgcctgtgatgaaagcgtgcgcctgggcccggcgccagcgcgcgaaagctac
ctctgtgccgaaaagatcatcgccgccgcgctggctacaggcgcacaggcgatccatccc
ggctatggtttcctgtcggagaatgccggcttcgcccaggcctgcgcccaggccgggctg
gtcttcatcggcccgcccgcgtcggccatcgaggccatgggctccaaggcggcagccaag
gcgctgatggaacaggctgccgtgccgctggtgccgggctatcacggcgaagaacaggag
agcggcttgctgcacagccaggccgatcgcatcggctacccggtgctgctcaaggccagc
gctggcggcggcggcaagggcatgcgcgtggtcgagcgttcggaagacttcgacgccgcg
ctggcctcctgcaagcgcgaggccattgccagcttcggcgacgatcgcgtgctggtggaa
aaatacctgacccggccgcgccacatcgagatccaggtcttcgccgatggccacggacac
tgcgtctacctgttcgaacgcgactgctccgtgcaacgccgccaccagaaggtgctggaa
gaagcccctgcgcccggcatgagcgaagagcgccgcgccgccatgggcgaggccgccgtg
gccgccgcccgcgccgtcggctatgtcggcgcaggcacggtggaattcatcgccaaccag
gatggcagcttctatttcatggagatgaacacccgcctgcaggtcgagcatccggtgacc
gaaatgatcaccggtctcgatctggtggagtggcagttacgtgtcgccgcagggcaggca
ttgccgctgaagcaagagcaattacgcatccacggccacgccatcgaagcgcgcatctat
gccgagaatcccgagaagggtttcctgcccgccatcggcacgctcacccgcatgcgcagt
gctgcagcggtggaattccgcctgggacagagcgcgccgggcgacccggcgcatgtgcgc
atcgacgcgggcgtgagagaaggcgacgccatctcgcccttctatgatccgatgatcgcc
aagctcatcgtctgggggccggaccgcgacgccgccctgcgcaacatgcagcgcgcgctg
gcgcaataccaggtggtcggcctggccaccaatatcgctttcctgcagcggctggtcgca
ggccaggccttttccacggcggccctcgataccggactgatcgagcggcatcgcgatacc
ctgttcccgccgccctcctcgcccgataccgagaccctggccctggccatcgccgcgatc
ctgcagcaggagcacgcacaagccgagcgcagcgatccctggtcgcaacgcaacggctgg
cgactcaatacccgcctgctgcgcacgctgcgtttcgagcacgacgcgggcgacacgacc
gtgcaactggactatgccggcgacggccagcactggtccttgctgacgaacgggcagacg
catgcgctgcaactgcacgcagccgacggcgacaccctgatcatctcgctggacggacgc
accctgcgcgccgatgtgctgcgcgaaggtgaatggctgcacgtcttcgatgcccacgga
cagcacagcctgcgccatgtcgatcccctggcccacgccggccatagcgaggccgaaggc
ggacgcctgaccgcgcccatgcccggcaagatcgtcgcgctgctggtgcagaaaggcgcg
agcgtggcgcatggcacgccgctgctgatcatggaggcgatgaagatggaacacaccatc
gccgcgcctgccgatggcgtggtcgaagacctgctctatgcagtcggcgaccaggtggcc
gaaggtgcgcagctactggaattcaaggccgcttga
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