KEGG   Haloarcula taiwanensis: BVU17_05715
Entry
BVU17_05715       CDS       T05292                                 
Name
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
hta  Haloarcula taiwanensis
Pathway
hta03030  DNA replication
hta03410  Base excision repair
hta03420  Nucleotide excision repair
hta03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hta00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BVU17_05715
   03410 Base excision repair
    BVU17_05715
   03420 Nucleotide excision repair
    BVU17_05715
   03430 Mismatch repair
    BVU17_05715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hta03032]
    BVU17_05715
   03400 DNA repair and recombination proteins [BR:hta03400]
    BVU17_05715
Enzymes [BR:hta01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BVU17_05715
    6.5.1.6  DNA ligase (ATP or NAD+)
     BVU17_05715
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     BVU17_05715
DNA replication proteins [BR:hta03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    BVU17_05715
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     BVU17_05715
DNA repair and recombination proteins [BR:hta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     BVU17_05715
   NER (nucleotide excision repair)
    Other NER factors
     BVU17_05715
   MMR (mismatch excision repair)
    Other MMR factors
     BVU17_05715
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: AUG47047
UniProt: A0A2H4ZX81
LinkDB
Position
I:1092793..1094451
AA seq 552 aa
MEFAAFADRADAIEAESADTAITEAVTDLFTDAGSDLSTLARFVQGRVFPAYESRTLDIG
PRLCYEAIARAAGQNISADDVEERLADMGEIGAVAASYDLGGQQGLAAFGAGGTAALTVA
ELDAELRDLAAVDGSGSQGTKVDILFGLFSRCSPTEASYLARLVLSEMRIGVGEGTVRDA
VAAAFDVPVDAVERAVQVSNDYGTVAEMARDEGEAGLATITLEIGRPVQAMLAQAGTVAG
ALEDWDRAAVEWKYDGARVQVHFDGETARLFSRNMEEVTDPLPEVVEAVEAALDAPAILD
GEVVAVDADGDPLPFQEVLRRFRRKHDVAAAREDVAVRLHAFDCLHADGEDLLDAPLETR
HDRLESLFPDGSDAVSEMWLSGDPEEIEDLEAAALAAGQEGIMLKDPTAAYSPGKRGKHW
RKRKPDVETLDCVVTGAEWGEGRRANVLGSFELSVRTDDGYATVGNVATGITDEELDDLT
ERFEPHVRAEDGRDVALTPAVVFEVGYEEIQVSQSYDSGYALRFPRFLSVREDKTPADAD
SLERVERLAESQ
NT seq 1659 nt   +upstreamnt  +downstreamnt
atggagtttgccgccttcgccgaccgggccgacgcaatcgaagccgagagtgccgatacc
gcgattacggaggcggtcactgacctgttcaccgatgcgggatcggacctctcgacgctc
gctcgcttcgtccagggccgggtgttcccggcctacgagtcgcgcacgctcgacatcggg
ccgcggctttgctacgaggcgattgcccgagcagcgggccagaatatcagcgctgacgac
gtggaggagcgcctcgccgacatgggcgaaatcggggccgtcgcggccagctacgacctc
ggcggccagcagggcctcgccgcgttcggtgccggcgggaccgccgcgctgaccgtcgcg
gaactcgacgccgagctacgggacctggccgccgtcgatggcagcgggagccaggggacg
aaagtcgacatcctctttggcctgttctcgcggtgctcgccgacggaagcgagctacctc
gcccggctcgtcctctcggagatgcgcatcggcgtcggcgaggggaccgtccgggacgcc
gtcgcggccgccttcgacgtgccggtcgacgccgtcgaacgggccgtccaggtgtcgaac
gactacggcacggtcgccgagatggcccgcgacgagggcgaggccggactggcgaccatc
acgctggaaatcggccgcccggtccaggcgatgctggcccaggccgggacagtcgccggc
gcgctcgaagactgggaccgcgccgccgtcgagtggaagtacgacggcgctcgcgtgcag
gtccacttcgacggcgaaaccgcccggctgttctcgcggaacatggaggaggtcaccgac
ccgctgccggaggtggtcgaagccgtcgaggcggcgctcgacgccccggcaatcctcgac
ggcgaggtggtcgcggtcgacgccgacggcgacccgctcccgttccaggaagtgctgcgg
cgcttccgccggaaacacgacgtggccgcggcccgcgaggacgtggcggtccgcctgcac
gccttcgactgcctgcacgccgacggcgaggacctgctggacgcgccgctggagacgcgc
cacgaccgtctcgaatcgctgttccccgacgggagcgacgccgtctcggagatgtggctg
tccggcgaccccgaggaaatcgaggacctggaagcggcggccctcgccgccggccaggag
ggcatcatgctgaaggacccgacggcggcgtactcgcccggcaagcggggcaagcactgg
cgcaagcgcaagcccgacgtggagaccctggattgcgtcgtcaccggcgcggagtggggc
gagggccgccgggcgaacgtcctcgggtcgttcgaactctcggtccggaccgacgacggc
tacgccaccgtcggcaacgtcgcgaccggtatcaccgacgaggagctggacgacctgacc
gagcggttcgaaccacacgtccgcgccgaggacggccgcgacgtggcgcttaccccggcg
gtcgtcttcgaggtcggctacgaggagatacaggtctcccagtcctacgactcgggctac
gcgctccggttcccccggttcctctcggtccgcgaggacaagacgcccgccgacgccgac
tcgctcgaacgggtcgagcggctggccgagtcccagtaa

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