Hydrogenobacter thermophilus: Hydth_0805
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Entry
Hydth_0805 CDS
T02106
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hte
Hydrogenobacter thermophilus
Pathway
hte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Hydth_0805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hte03019
]
Hydth_0805
03009 Ribosome biogenesis [BR:
hte03009
]
Hydth_0805
Enzymes [BR:
hte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Hydth_0805
Messenger RNA biogenesis [BR:
hte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Hydth_0805
Ribosome biogenesis [BR:
hte03009
]
Prokaryotic type
rRNA helicases
Hydth_0805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
UTP25
ResIII
HEM4
PRAI
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ADO45202
LinkDB
All DBs
Position
complement(743557..744654)
Genome browser
AA seq
365 aa
AA seq
DB search
MEFNFQQLSEILQKAIRDLGYEEPTPIQKEAIPLALKGYDIMGQAATGTGKTAAFGIPIV
EKISKDDGLKALVLTPTRELALQVKEQLYALSKYKALKVFVFYGGTPVRRDLELLSKVVP
NIVIGTPGRIKDLLSRGVLNLGGVSFLVLDEADLMLDMGFVEDIESIIAYTPKDRQTFLF
SATIPKEIELLARKHLKDDYKFVRVISAELKPKIEERLIRLNSSKQKISELERILREHLL
EKVIIFVRTKKDARDISQELKNRGFSVVSLHGDMTQRQRENALKLFREGKVKTVVATDVA
SRGLDIKGVSLVINYQIPEDPEVYIHRIGRTGRVGSYGKAYSLITPEDSKALWRIKKVKE
RYTGV
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaattttcaacagcttagtgaaatacttcagaaggcaataagggatctgggt
tatgaggaacccacacccatacagaaggaagctatacctttagctttgaaaggttatgac
attatgggtcaggcggcaacgggaacggggaaaactgctgcctttggcattcccatagta
gagaagataagcaaagatgacggcttaaaggctctggttcttacacctacccgtgagctt
gcccttcaggttaaagaacagctctatgccctatccaagtacaaagctcttaaggtgttt
gtcttttacggaggaacacctgtaaggagagaccttgaacttctatccaaggttgtacct
aacatagtcataggcacgcctggcaggataaaggacctcctaagtaggggggtgctaaac
cttggtggtgtttcctttcttgtccttgatgaagcggaccttatgcttgacatgggcttt
gtggaggacatagagagcataatagcctatacaccaaaagacagacagacctttctcttt
tccgcgaccataccaaaggagatagaactgcttgcaagaaagcacttaaaagatgactac
aaattcgtaagggtaatatctgcagagctaaagccaaagatagaggagaggctcataagg
cttaactcatccaagcaaaagatatccgagcttgagaggatactcagagaacatcttctg
gaaaaagttattatttttgtgagaaccaagaaggatgcacgagatatatctcaggaactc
aaaaacagaggctttagcgtagtgtctttgcacggagatatgacccaaaggcagagagaa
aacgctctcaagcttttcagagagggtaaagtgaaaacggtggttgctacggatgtagcc
tcaagaggtcttgacataaagggtgtaagtctggtgattaactatcagatacccgaagac
cctgaggtttatatacacagaataggaagaacgggaagagtaggaagttatggcaaagca
tacagcctcataacacccgaagacagcaaagccctttggaggataaagaaggtaaaggaa
agatatactggggtttaa
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