Humibacter sp. BT305: DVJ78_13485
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Entry
DVJ78_13485 CDS
T05558
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
hum
Humibacter sp. BT305
Pathway
hum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DVJ78_13485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hum03000
]
DVJ78_13485
03400 DNA repair and recombination proteins [BR:
hum03400
]
DVJ78_13485
Enzymes [BR:
hum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DVJ78_13485
Transcription factors [BR:
hum03000
]
Prokaryotic type
Helix-turn-helix
AraC family
DVJ78_13485
DNA repair and recombination proteins [BR:
hum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DVJ78_13485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AXH36302
LinkDB
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Position
complement(2860162..2861928)
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AA seq
588 aa
AA seq
DB search
MDFSERYRIIQSRDARFDGQFITAVRSTGIYCRPSCPARTPKEANVTFYETSAAAHEAGY
RACKRCLPEAVPGTPAWNLRDDLAGRAMRLIADGVVEREGVGGLSRRLGYSERHVARVLT
EQLGAGPLALARAHRAQAARTLLTSTGLSMAEVAFAAGFASIRQFNDTVSEVFEQTPSQL
RARYSATGDQPGGSVRLSLPAREPFDSAGVFAWLAARAVPGVEIASADSYTRSLALPGGP
AWFTVTATAGGVALEAHLSTLSDLSTLVARVRRLFDLDADPIAVDAALVDGADRASSGSA
LAAAVRSNPGIRLPGTVDPAEMLVRAMVGQQISVAAARTHLSRLAAVAGRPLAMEGGPEL
LFPDPAAIAEHAEAVTGPRARLAALRGAAEAIASGSLVLTSGDAAAEQRAALLAMPGIGP
WTAGYVSMRVLGAPDVLLTGDVALRTGAAVLGAPSTPRELARWAEDFAPWRSYLSLHLWR
AALTGSAAPRPSGESDPSLPAPSPDAAPAPSPSAASAPSASAASAPSPSATRAPSPSAAP
APSRAPAPALSAAPSPAPAPPPAPGRRRDPHPASPHPRTTRPLTKESS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcggagcggtaccgcatcatccagtcgcgggatgcgcgattcgacgggcag
ttcatcaccgccgtccgctccaccggcatctactgccgcccgagctgccccgcgcggacg
ccgaaggaggcgaacgtcacgttctacgagaccagcgccgcggcccacgaggcgggctac
cgggcatgcaagcgctgccttcccgaggcggtgcccggcacgccggcctggaacctgcgc
gacgatctcgccgggcgggccatgcggctgatcgccgacggcgtcgtcgagcgcgagggc
gtcggcgggctgtcgcgtcggctgggctactccgagcgccacgtggcccgggtgctcacc
gagcagctcggggcggggccgctcgcgctcgcccgggcgcaccgggcgcaggccgcgcgg
acgctcctgacgtccaccgggctcagcatggccgaggtcgcgttcgcagcgggcttcgcg
tccatccgccagttcaacgacacggtgtcggaggtcttcgagcagaccccctcgcagcta
agggcacggtactccgccacgggggaccagccgggcgggagcgtgcggctctcgctgccg
gcccgcgagccgttcgactctgcgggtgtcttcgcgtggctcgcggcccgcgccgtcccc
ggggtggagatcgcgtccgccgactcgtacacgcggtcgctcgcgctgcccgggggaccg
gcgtggttcaccgtgaccgcgaccgcgggcggtgtggcgctcgaggcgcacctctcgacc
ctctccgacctgtcgacgctcgtcgcccgggtgcggcgcctgttcgacctcgacgccgat
cccatcgccgtcgacgccgcactcgtcgacggcgctgatcgggcgtcgagcgggtcggcg
ctcgcggcggcggtgcgctcgaacccgggcatccgcctgccgggcaccgtcgacccggcc
gagatgctcgtgcgggcgatggtggggcagcagatcagcgtggccgcggccaggacccac
ctcagccggctcgccgcggtcgccggacgaccgctcgcgatggagggcggccccgagctg
ctcttccccgacccggcggccatcgccgagcacgcggaggcggtcaccggcccgcgtgcg
cgcctggccgcgctgcggggcgcggcggaggccatcgcgtccggctcgctcgtgctcacc
agcggcgatgccgccgccgagcagcgggccgcgctcctggcgatgcccgggatcggaccg
tggacggcgggctacgtctcgatgcgcgtgctcggcgcacccgacgtgctcctgacgggc
gacgtcgccctccgcacgggcgcggcggtgctcggcgccccctccacgccccgcgagctc
gcccggtgggcggaggacttcgcgccgtggcggtcgtacctgtcgctccacctctggcgt
gcggccctgacgggctccgccgctccgcgcccatccggcgagagcgacccctcgttgccg
gccccctccccggacgccgctccggcaccctcgccgtccgccgcgtcggcgccctctgcg
tccgccgcgtcggcgccctcgccgtccgccacccgggcgccctcgccgtccgccgctccg
gcgccttcgcgggcccccgctccggccctctcggcggccccctccccggcgcccgcgccg
ccaccggcgccggggaggcgacgcgacccgcatccggcgtccccgcatccgcggaccacc
cgccccctcacgaaggagtcgtcatga
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