Homalodisca vitripennis (glassy-winged sharpshooter): 124353596
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Entry
124353596 CDS
T09217
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03013
Nucleocytoplasmic transport
hvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124353596
09122 Translation
03013 Nucleocytoplasmic transport
124353596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvi03019
]
124353596
03041 Spliceosome [BR:
hvi03041
]
124353596
Messenger RNA biogenesis [BR:
hvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
124353596
Spliceosome [BR:
hvi03041
]
Complex C
Other components
EJC/TREX
124353596
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124353596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
124353596
NCBI-ProteinID:
XP_046659465
EnsemblRapid:
LOC124353596
LinkDB
All DBs
Position
2:complement(17219776..17276826)
Genome browser
AA seq
678 aa
AA seq
DB search
MMKTAKTYDAMRNDFMEAVRISMKSDVGPIQKVYDSLQELDGDKRTALDQGFRDYLLLLL
GKPQETQVWERFLSLCVEACRREMATVTMPVVLLGDIFDCLTLDRCEQLFTFVENGVSIW
KEELFFTACKNNLLRMCNDLLRRLSRSQNTVFCGRILLFLAKFFPFSERSGLNIVSEFNI
DNITEFSNDEAVDTTKEAVEKMDESMDEGNADKIRIDYSLYSKFWALQNFFRNPLLVYNK
VQWKIFTNHTDSVTSAFKSWKLEGVQNKKLVTAEQMVTETMDREHYFAKFLTNQKLLELQ
LSDINFRRYVLVQFLILFQYLNATVKFKNENQELRPNESEWVKDTTDQVYSLLRETPPDG
ETFAKTVQHVLKREESWNNWKNEGCPELHKPATPAEEATEDDKRQNSKIPKRPKKRIGTI
IKEAQAQKKFMMGNPELTRLWNYMPDNLEACRAPERNFLMSLEDYFKDAIEQLDPAAMVE
DQYKVVNDGNFGWRALRLLALQSSHFFTHSNNPINKLPEYLEAMIKKIAKERPIMLPSGE
KQEPLDVAESNTVLVNETEAMAEEEDELLKSDEKRDEMGSEEQPETPEASQNAPGIAAHI
MDAVAKNIDAQWRELAEKMGFTDTIQYIEGSLQSDLERARYVVQLWAEDDLDNSAEQLAK
SLEAHGFPKAAAVVKQSL
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagacggcaaaaacttatgatgcgatgagaaacgactttatggaggctgtcaga
atcagtatgaagagtgatgtggggcccatccagaaggtgtacgactccttgcaggagttg
gacggtgacaagcgcacagccttggaccaggggttccgggactatctgctgctcctgctg
ggaaagcctcaggagacccaggtgtgggagaggttcctgagcctttgtgtggaggcctgc
cgcagagagatggccacggtcacaatgccagtagtcctgctgggggacatctttgactgt
ctcacgctggaccggtgcgagcaactcttcaccttcgtggagaacggggtgagcatctgg
aaggaagagttgtttttcaccgcctgcaagaacaatctgctccggatgtgcaacgatttg
ctgagacgactgtcccggtcacagaacacagtattctgcggaagaattctgctgttcctc
gcaaagttttttccattttcagagcgatcaggcttgaatattgtgagtgagttcaacata
gacaacataaccgagttcagcaatgacgaagcagtggatactacaaaggaggctgtggag
aaaatggatgaatctatggacgaaggaaatgcagacaagattagaattgactacagtctc
tactccaagttttgggctttgcagaactttttccgcaatcccctcctggtgtacaataaa
gttcagtggaaaatctttaccaaccatacagatagtgtaacctcagcattcaagagctgg
aagttggaaggggtccagaacaagaagctggtgacagccgagcagatggtgacagagacc
atggacagagaacactacttcgccaagttcttaaccaatcagaaactgctggaactgcaa
ctgagcgacatcaacttccgtcgctacgtcctcgtccagttcctgatcctcttccagtac
ttgaatgccactgtcaagttcaagaatgaaaaccaggagttaagaccgaacgaatccgaa
tgggtgaaagataccacggatcaggtgtacagtctgctcagagagaccccacctgatggt
gagacctttgccaagactgtacaacatgttttgaagagagaagaatcctggaacaactgg
aaaaatgagggttgtcccgaactgcataagccggcgaccccagcagaagaggcaaccgaa
gatgacaaacggcagaattccaaaatcccaaaacgaccaaagaagcgtattggcacgata
atcaaggaggctcaagctcagaaaaagttcatgatgggaaatccggagttgaccagactg
tggaactacatgcccgataacctggaggcctgccgggcaccggagcggaacttcctcatg
tctctagaggattatttcaaggatgccatcgaacagctggatcctgcagccatggtcgag
gatcagtacaaggttgtgaacgatggcaacttcgggtggcgtgccctgaggctcctggca
cttcagtcttcacacttcttcacccacagcaacaaccccatcaacaagttgccggaatat
ctggaggccatgatcaagaaaattgctaaagaacgacccattatgctgccgagtggagag
aagcaagaaccattagacgtggccgaatcgaacacagttctggtaaatgagacagaagca
atggcggaagaagaagatgaactcttgaaatctgatgagaagcgagatgaaatgggttca
gaggagcaacctgaaactccggaagcaagccagaatgcaccgggaattgcagcgcacatt
atggatgctgtagcgaagaacatagacgcacagtggcgagaactggccgagaaaatgggc
ttcacagacacgatccagtacattgagggatccctgcagagtgaccttgaacgtgcgcgg
tatgtcgttcagttgtgggccgaggacgatctcgacaacagcgcagagcagctggctaag
tctctagaggcccacgggtttcccaaggctgccgctgtcgtcaaacaatctttataa
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integrated database retrieval system
