Homalodisca vitripennis (glassy-winged sharpshooter): 124356701
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Entry
124356701 CDS
T09217
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03008
Ribosome biogenesis in eukaryotes
hvi03013
Nucleocytoplasmic transport
hvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124356701
03015 mRNA surveillance pathway
124356701
03008 Ribosome biogenesis in eukaryotes
124356701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvi03019
]
124356701
03009 Ribosome biogenesis [BR:
hvi03009
]
124356701
Messenger RNA biogenesis [BR:
hvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124356701
mRNA cycle factors
Stress granule specific factors
124356701
Ribosome biogenesis [BR:
hvi03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
124356701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAP_C
Tap-RNA_bind
NTF2
LRR_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
124356701
NCBI-ProteinID:
XP_046663819
EnsemblRapid:
LOC124356701
LinkDB
All DBs
Position
3:26299138..26317714
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AA seq
633 aa
AA seq
DB search
MPNKNNRMKNKNMGYYGHNEHDDRVPFTSESTRRVSFKNYGNNRFKNYRQRGRDDKMRAA
LAIDDDVEMMIGNDAGNYHRGRYQGGYQMRGVYSKRRRGGARLDSPVPGRKLPESQLQWY
KVTIPEGHKYERSYLLGLIQSYIKPFTLTAYGYKTQGDSICFYVDDYKTAQQILYADRKI
TTSDSWRLALIVRANIPQVDINDSMRALMKLAMASRYNAVNKALDLSKFHTDPVITKEDV
FCPLNRTNVMTAAIQIIADSIPDLLALNLSENKLTAVDCLKILKTSTPNLKVLHIGKNNI
RSMSQFDSFQGLSVEELELDGNPLCDLFRDKESYIREVQKRFQKVIKLDGTEVPRMITFN
VEEEIALVQSQGSFVCDPAAANVIRPFLQQYYSLYDSDTRAPLLDAYHEDAQFSLACSHQ
NTATNTMAPYLQDSRNLLVVNNAEKRKRLLRRGRANILAYLTSLPKTQHDPATLTVDCSI
YSPSIIMLTVTGVFREVGERKYPLRSFHRSFVIVPVGSGFCIINELLHITPATSDQVKGA
FKTAETAAAPPPVAPTAPVVPPPVPAVVPAVVPVEVDIATKQQMVTTLATQSGMNLTWAE
KCLSENGWDFNRAAFVFSELQKQGKIPAEAFIK
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcctaataaaaataaccgaatgaagaataaaaatatgggttattatggccataatgaa
catgatgaccgggtaccttttacatcagagagcacaaggagagtctctttcaaaaattat
ggtaacaaccgttttaaaaattatcgtcaaagaggtagagatgacaaaatgcgagctgca
cttgccatcgatgatgatgtggaaatgatgattggaaatgatgctggaaattaccaccgt
ggtagatatcaaggaggttatcaaatgagaggagtgtactccaagagaaggagaggtggt
gccagactagattctccggtacctggtagaaaactcccagaaagtcaattacagtggtac
aaagtcacgattccagaaggacataagtatgaacggagttatttgctgggactcatccaa
agttacatcaagcctttcacattgacagcatatggttacaagacacaaggagacagtata
tgtttttatgtagacgactacaagacagcacaacagattctgtacgcagacagaaaaatc
acaacttctgatagttggaggttggcattgatcgtcagggccaacatacctcaggttgac
atcaacgacagtatgagggcactgatgaagctagccatggccagccgttacaatgctgtc
aataaggctctggacctcagcaagttccatactgatccagttataacaaaggaggatgtc
ttttgcccactgaatcgaaccaatgtgatgacagcggcaatacagattattgcagacagt
ataccagacctcttggccctcaacttgtcagaaaacaagctgacggcggtagactgcctc
aagatactgaagaccagcacacccaacctcaaagtactgcacattggcaaaaataatatt
cggtccatgtcccagtttgattcgttccaaggtttatctgtggaggaactagaactggac
ggcaaccctttgtgtgatctatttcgggacaaggagtcttacatcagggaggttcagaag
agatttcagaaagtgatcaagctggacggaactgaagtgccacgcatgatcacgttcaac
gtagaggaggagatcgcattggtgcaatcacagggcagttttgtgtgtgacccagccgca
gccaacgtgatcaggccattcctccagcagtactacagtctgtatgacagcgacacccgt
gcaccgttactagatgcgtaccacgaggacgcacagttcagtctggcctgctctcatcag
aataccgccaccaacaccatggcaccgtacctgcaggacagtcgtaatctcctggtcgtc
aacaacgccgagaagagaaaaaggctgcttagacgtggcagagctaacattctagcgtac
ctgacgtcgctgcctaaaactcagcacgatcccgcaacgcttactgtcgactgttccatc
tacagtccatcaattatcatgttaactgtgactggagtgttccgagaagtgggagagagg
aagtatcctctgagatcgttccatcgctcgtttgttatcgttcctgtcggctcaggcttt
tgcatcatcaatgagttgctccacatcacgcccgccacttcagaccaagtcaagggagca
ttcaaaacagctgagactgcagctgctcccccacccgttgcacccactgcccctgtggta
ccccctccagtccctgcagtggtaccagcggtagtgccagttgaagtggacatcgccact
aagcagcaaatggtcaccactcttgccacacagtctggaatgaacctcacatgggctgag
aagtgtctaagcgagaatggttgggacttcaaccgcgcagcgtttgtcttcagtgaactt
cagaagcaagggaaaattccagccgaggctttcattaaatga
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