Homalodisca vitripennis (glassy-winged sharpshooter): 124362446
Help
Entry
124362446 CDS
T09217
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124362446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvi03041
]
124362446
Enzymes [BR:
hvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124362446
Spliceosome [BR:
hvi03041
]
Complex A
U2 snRNP components
U2 related factors
124362446
Complex B
124362446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
124362446
NCBI-ProteinID:
XP_046672913
EnsemblRapid:
LOC124362446
LinkDB
All DBs
Position
5:complement(82734560..82812385)
Genome browser
AA seq
1001 aa
AA seq
DB search
MVRSSGSHHRKRSRSRSLTPDHKRSKSSRDYDKERVRRRSRSRDRIRRSRSRDRKKDKKA
SESRVRSKPLKLKRRSRSKSRSKSKDKNPKKEEKKETKAEDEPFDPTNLDKEEEQKRLEL
EMQKRRERIERWRAERKKKELEIVKKEVKNSLANLQLPMKKWNLEDDSDEEEEAKTEGKA
DEQEEVDPLDAFMQEVQEEVRKVNKMDSKKAGGTEKVGAPAPQANSGVVIVTGVAKKSSD
KRKGELIEQNQDGLEYLSEEEEEDLTTTATNLANKQKKELAKVDHTGVDYMQFRKSFYTE
VPEVAKMTPEEVELYREELEGIRVKGKGCPKPIKTWAQCGVSKKMLEALKRQDYEKPTPI
QAQAIPAIMSGRDLIGIAKTGSGKTLAFVLPMLRHIMDQPPLEANDGPIALIMTPTRELC
MQIGKETRKFTKSLNLHVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT
NLKRVTYIVLDEADRMFDMGFEPQVMRIIDNIRPDRQTVMFSATFPRQMEALARRILTKP
IEIQVGGRSVVCKEVEQHCVVLEEDQKFLKLLELLGHYQDMGSVIVFVDKQENADALLKD
LMKASYPCMSLHGGIDQYDRDSTIVDFKAGKVKLLIATSVAARGLDVKHLILVVNYDCPN
HYEDYVHRCGRTGRAGNKGYAYTFVTPEQERYSGEIIRAFELASVPVPEPLRALFEGYKA
KQLAEGKKVHSGGGFSGKGFKFDEQEAQMVNEKKKFQKAALGLQDSDDEDLEGDIDQQIE
SMLAPKRIVKEIKAPLGSLNSSGNSQGGSVSSPTQITTDKLELAKRLASRINMAKNLGAE
AKGATQQAAEAILKGGGSQPIITAKTVAEQLAAKLNTRLNYQPKENDDKSEEEQVETFRK
YEEELEINDFPQQARWRVTSKEALAQISEYSEAGITVRGTYYPTGKAPPEGERKLFLAIE
STNELAVSKAKIEITRLIKEELLKLQTSAHHSINKARYKVV
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggttagaagtagtggaagccatcatagaaagaggtcgaggagccggtcattgacacca
gatcataaaagaagtaaatcttctcgtgattatgataaagaacgtgttagacggaggagt
cggtcaagagatagaataaggagatcccgtagcagggatagaaagaaggacaaaaaagct
tcagagtccagagtaaggagcaagcctttgaagctaaaacgcagatcgagatccaaaagc
agatccaaatctaaagataaaaatccaaaaaaagaagagaagaaagaaactaaagcagaa
gatgaaccatttgatcctacaaatttagataaagaggaagaacagaaaagacttgagctt
gaaatgcaaaagagaagggaaagaattgaaaggtggagagctgaacgtaagaagaaggag
ttagaaattgtcaaaaaggaagtaaagaattcactagcaaatcttcaacttccaatgaag
aaatggaatttagaggatgatagtgatgaagaagaagaggcaaaaacagaaggaaaggcg
gatgaacaagaagaagttgatcctctagacgctttcatgcaggaagttcaagaagaagta
aggaaagttaataaaatggatagtaagaaggctggaggaacagagaaagtaggggcccct
gcaccgcaagccaactctggggttgtcatagtgacaggagttgccaagaagagctcagat
aagcgcaaaggagaattaattgaacagaatcaagatggcctagagtacttgtcagaagaa
gaggaagaagacttgacaacaacagccacgaacttggcaaacaagcagaaaaaggaattg
gccaaggttgaccacactggagtggattacatgcagttcagaaagtcgttttacacagaa
gtacctgaagttgctaaaatgactcccgaagaagtcgaactttacagagaggagttggaa
ggtattagggttaaaggtaagggctgtcctaagcccatcaagacctgggctcagtgtgga
gtcagcaagaaaatgttagaagctctcaagagacaggattatgagaaaccaacacctata
caagcacaggccattcctgctatcatgtctggacgtgatctaattggtattgccaaaacc
ggcagtggtaaaacattggcgtttgtgctgcctatgctgaggcacattatggaccagcca
ccacttgaagccaacgatggtccaattgctttaataatgacgcccactagggaattgtgt
atgcagattggtaaggaaacccgaaagtttacaaagtcgttgaacctacacgtagtgtgc
gtgtatggagggactggcatctcggagcagatagctgagctgaagcgaggggctgagatc
atcgtctgtactcctggcagaatgatagacatgctggctgcaaacagcggaagagttaca
aatttgaaacgtgtcacttacatcgttttggatgaagcagacaggatgttcgacatgggg
tttgaaccacaggtgatgcgaatcatcgataacattcgaccagacaggcaaacagtgatg
tttagtgctacatttcccaggcaaatggaagccttggccagaaggattctcacaaaacca
attgagattcaagtaggagggcgcagtgtggtctgtaaggaggtagaacagcactgtgtc
gtcctggaagaggaccaaaaattcctgaagctgctggaacttctaggacactatcaggac
atgggcagtgtgatcgtgtttgtggacaagcaagagaatgcggatgctctactcaaggac
ctgatgaaggcctcatacccctgcatgtcattgcatggtggtatcgaccagtacgacaga
gacagcactattgttgacttcaaggctggaaaggtcaaattattgattgccacttcagtt
gctgcccgtggtctagatgtcaaacatttaatcttggtagtgaactacgactgtcctaac
cattacgaagactacgtacaccgttgtgggcgtactggaagagctggtaataagggatat
gcttatacctttgtcaccccggaacaagaaaggtattcaggagaaatcattcgagctttt
gagctcgcttctgttcctgtgcccgaacctctccgagctttgtttgagggctacaaggca
aagcagctggcagaaggtaaaaaagttcattctggtgggggatttagtggcaaaggattc
aagtttgatgagcaagaagctcaaatggtgaatgaaaagaaaaaatttcaaaaagctgct
cttggtttgcaagattcagatgatgaagacttggagggagacattgatcaacaaattgag
agcatgttggctccaaagcggatagtcaaggaaatcaaagcaccacttggctctttgaat
tcatcaggaaactctcaaggtggttcagtatcttctccaacccagataacaactgacaag
ttggaacttgccaagagactagcttcgaggataaatatggccaagaatctaggggcagaa
gcgaagggagccactcaacaggctgcagaggccattctcaagggtggaggatcacagcca
atcattactgctaagacagtagcagaacagcttgccgccaaactgaacactagactgaac
tatcagccgaaagagaatgatgacaagtctgaggaggaacaagtggagacattccgtaaa
tacgaggaagagctggagatcaatgactttcctcaacaggctcgctggagagttacatca
aaggaagccttggcgcagatatctgagtactcggaagcaggtatcactgttcgaggaacg
tactacccaacaggcaaagctcctcctgaaggtgaacgtaagctgtttctggcgattgag
agtacaaacgaactggccgtgtccaaagctaagattgagatcactcgactcatcaaagaa
gagctgctgaagttacagacatcagcacaccacagcattaacaaagctagatataaagtg
gtttag
DBGET
integrated database retrieval system
