Homalodisca vitripennis (glassy-winged sharpshooter): 124366155
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Entry
124366155 CDS
T09217
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03022
Basal transcription factors
hvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124366155
09124 Replication and repair
03420 Nucleotide excision repair
124366155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvi03021
]
124366155
03400 DNA repair and recombination proteins [BR:
hvi03400
]
124366155
Transcription machinery [BR:
hvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124366155
DNA repair and recombination proteins [BR:
hvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124366155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
DUF6593
TssR_VWA
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
124366155
NCBI-ProteinID:
XP_046678433
EnsemblRapid:
LOC124366155
LinkDB
All DBs
Position
7:complement(106813734..106825597)
Genome browser
AA seq
402 aa
AA seq
DB search
MAEDEDGKEYRWETGYEKTWEALQEDDDGLLEASVADIIQRAKRKRQAERKGHTKLGMMR
HLYLIIDSSEAMLDQDLKPTRQLCTNKLLEGFIEEFFDQNPISQMGMISTRNKRADKVSE
LAGNARKHLNVLQAQFSQPSQCSGEPSLQNALELAASSLKMLPSHASREVLIILGSLTTC
DPGDINQTIVLLKSHNVRVSVIGLAAEVRVCSALCRETGGTYSVVLDDRHFRDLLYQHVE
PPPSAAAGSQEASLVKMGFPHHEMTEGRSSSLTMCMCHIDSTSDASKLKSGGYFCPQCRS
KYCELPTECRVCGLTLVSAPHLARSYHHLFPVQAFVQLDLHSTDQRYCYSCRVRFGDNEK
YVYSCGTCHRVFCLECDMFIHDTLHTCPGCATHQSTFLQQGR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagatgaagatggcaaagaataccgctgggaaactggctacgagaagacttgg
gaagcgcttcaagaggacgacgatggcttgttggaagcgtctgtggcagacatcatccag
agggctaagcgcaaacgccaggccgaaagaaagggtcacaccaagctgggcatgatgaga
catctctacctcatcatcgactcatcagaagccatgctcgatcaggatctgaagccaacg
agacagctgtgcacaaataagctgttggagggtttcattgaggagttcttcgaccagaat
cctatcagtcagatgggtatgatctcgacccgcaacaaacgagcagacaaggtgtcagaa
ctcgctggcaatgctcgcaaacacctgaatgtactccaggcacagttcagccaaccatca
cagtgtagtggggagccgtccctgcagaacgcccttgagttggcagcatcgtcactcaag
atgttgccgtcgcatgctagccgagaggttctgataatactgggcagtctgaccacatgt
gatcccggtgacatcaaccagactatcgtgttgctgaaatcacacaatgtgagagtgtca
gtgattggactggcagcagaggtgcgagtgtgcagcgctctctgtcgagagactggtggc
acctacagtgtggtcctggatgatagacacttccgtgacctgttgtatcagcacgtggag
ccccctccctccgccgcggctggcagccaagaggccagcctcgtcaagatgggcttcccc
caccatgagatgacagaggggcgcagctcttcgctcaccatgtgcatgtgccatattgac
agcacatcggacgccagtaagttgaagagtgggggctacttctgcccacagtgccgcagc
aagtactgtgaactgcccacagagtgcagggtgtgtgggctgactctggtctcggcccct
cacttggcccgttcctaccaccacctgttccctgtccaggcctttgtccagttggactta
cacagcaccgaccagcggtactgctactcttgccgtgttcgtttcggtgacaacgagaaa
tatgtgtacagctgtgggacatgtcatcgcgtgttctgtctcgagtgcgacatgtttata
catgacactctccacacatgtcctggctgtgcgacgcatcagtccacattccttcagcaa
ggaagatag
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integrated database retrieval system
