KEGG   Homalodisca vitripennis (glassy-winged sharpshooter): 124367333
Entry
124367333         CDS       T09217                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
hvi  Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03030  DNA replication
hvi03410  Base excision repair
hvi03420  Nucleotide excision repair
hvi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124367333
   03410 Base excision repair
    124367333
   03420 Nucleotide excision repair
    124367333
   03430 Mismatch repair
    124367333
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hvi03032]
    124367333
   03400 DNA repair and recombination proteins [BR:hvi03400]
    124367333
Enzymes [BR:hvi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     124367333
    6.5.1.6  DNA ligase (ATP or NAD+)
     124367333
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     124367333
DNA replication proteins [BR:hvi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    124367333
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     124367333
DNA repair and recombination proteins [BR:hvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     124367333
   NER (nucleotide excision repair)
    Other NER factors
     124367333
   MMR (mismatch excision repair)
    Other MMR factors
     124367333
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme FERM_N_2 PGM1_C
Other DBs
NCBI-GeneID: 124367333
NCBI-ProteinID: XP_046680026
EnsemblRapid: LOC124367333
LinkDB
Position
8:14375760..14402118
AA seq 969 aa
MAQKSITSFFKPKPQNPDTSKVKNCEESPKKNICEENGVSRSPSPAKSGKRKRRQIIYSD
DEEESGGSPITEKSPPKKKIITNGNVDKKDVSEESEDDTKENETRFPKEESSCSSQQIST
SPLKTPKRITATRSLPAGSPLHPNIIKVLDEQRNKNKLEGEKSGDSSGDEDFKQLPNDSE
SDSPMEEAEVIEPAKDIPVKKSKASTKSEIKDKKSTPKGATKKKTSPKSKLSQFKKQPSK
SAKETSEVKKSDEIKTEEKSDQVEKEDNGCTEEKSPKEESEKVPSPKKKQIHSFFGVKKD
KDGKPSAPPADPGASYDPSKSKYHPIEDAFWKHGEKVPYLALARTLEEVEGVKARLKMIE
ILSNYLRSVVVLSPDDLLPSVYLCLNKLAPAYHSLELGVADTTLYKTIAQTTGRSVAQIK
SDVAAAGDVGIVAEQSKSTQRVMFKPAPLTVRGVFDKLKEIAQMSGQASMGKKVDKIQSM
FVACRFSEARFLMRSLAGKLRIGLAEQSVLQAIALACVTTPPCQGFPPEKINVASTMSAE
AFKSRLDEEALIIKTTYCECPNYDMIIPVILREGVKALPQHCRLTPGIPLKPMLAHPTKG
VSEVLQRFDGLKFTCEWKYDGERAQIHLSEDGKVSVYSRNQEDNTSKYPDIVGRLPSCLG
SEVKSCVLDTEAVAWDCVNKRIQPFQVLSTRKKKDCKEDEIKVQVCVYMFDLLYLNGEPL
VQRPLAERRKLLKENFRQVEEQLVFATSLDTTTMEEVQDFLEESVKGNCEGLMVKTLESD
ATYEIAKRSRNWLKLKKDYLDGVGDTLDLVVVGGYFGKGKRAGLYGGFLLACYHPDTEEY
QSVCKLGTGFSDEALQKHTETLKKMVIPSPRPYFRYDTSHEPDEWFDATAVWEVKCADLS
LSPVHRAAVGIVDPDKGISLRFPRFIRIRDDKTAEEATSAQQIADMYQNQDQIKNQQGDS
NKIAEEDFY
NT seq 2910 nt   +upstreamnt  +downstreamnt
atggctcagaaaagtataacgtcttttttcaaaccaaaacctcagaatccagacacatca
aaggtcaaaaattgtgaagagtcgccaaagaaaaacatttgtgaggaaaatggagtgagc
cgaagtccttcacctgcaaaaagtggaaaacggaaaaggagacaaataatctacagtgat
gacgaagaagaaagtggtggaagtcctatcacagaaaaatctccaccgaaaaagaaaata
atcaccaatggtaacgtcgataaaaaagacgtgtcagaagaaagtgaagacgacaccaaa
gaaaatgagactagatttccaaaagaagaaagcagttgttcttcacaacagatatccaca
tcacctctaaaaacaccaaaaagaattactgctacaaggagtttacctgctggcagccct
ttgcacccaaacataataaaagttttagatgagcaaagaaataaaaataagctagaaggt
gaaaaaagtggtgattcttctggtgatgaagattttaaacagctgcccaatgattcagaa
tctgattcgccgatggaagaggccgaagtgattgaacctgcaaaagacatacctgtaaaa
aaatctaaagctagtacaaaaagtgaaataaaagacaaaaaaagtactccgaaaggagca
acaaaaaagaaaacctctccaaagtcaaagcttagccagtttaaaaaacaaccaagtaag
agtgccaaggaaacatctgaagtaaaaaaatctgatgagataaagacggaggaaaaatca
gatcaagttgagaaagaagacaatggctgtacggaagaaaaatcaccaaaagaggaatca
gaaaaggttccttcacctaagaagaagcagattcacagtttctttggagtgaagaaggat
aaagacggcaagcctagtgcgcctccggcggaccctggagcaagttacgacccatccaag
agcaaataccatcccattgaagatgctttctggaagcacggagaaaaggtcccttacctg
gcgttggctcgcacgctggaggaggtcgagggtgtgaaggcaaggctgaagatgattgag
atactgtccaactaccttcgctctgtggtggtgctgagtccagacgatctgctaccctcc
gtctacctgtgtctgaacaagctggctccggcgtaccacagtctggagctgggcgtggca
gacaccacgctgtacaagacgatagcccagaccaccgggcggtctgttgcgcagatcaag
tcggacgtagcggctgcaggagatgtgggcattgtggcggaacagagcaagtctacgcag
cgtgtcatgttcaagccggctccactcactgtgcgcggtgtctttgacaagctcaaagag
atagcgcagatgtccggtcaggcttcaatgggcaagaaagtagacaaaatccagtcgatg
tttgtggcgtgccgcttttccgaggcccgtttcctgatgcggtctctggccggtaaactc
cgtattggactggcagaacaatctgtcttgcaggccatcgcactagcctgtgtgactacg
ccgccgtgtcaaggctttcctccggagaagattaacgttgccagcacaatgtcagccgaa
gccttcaagtctcgactggatgaagaggcccttatcatcaagaccacttactgtgagtgc
cccaactatgacatgatcatccctgtgatcctgcgtgagggggtgaaggcacttccccag
cattgtcgtctgactccagggataccactcaaacccatgttggcacaccctaccaaagga
gtgtccgaagtgctccaacggttcgatggacttaagttcacttgcgaatggaagtatgat
ggagagagagctcagatccacctgagcgaagacggcaaagttagtgtatacagcaggaac
caggaggacaacaccagcaaatacccggacatcgtgggtcgcctgccctcatgcctgggg
tcagaggtcaagagctgtgtgttggacactgaggcggtggcgtgggactgtgtcaacaag
cggatacagcccttccaagtgctcagcactcgcaagaaaaaggactgcaaggaggatgag
atcaaggtgcaggtgtgtgtttacatgttcgacctactctacctcaacggtgagccgttg
gtgcagcggccactggcggaacggcggaaattgctcaaagagaacttccgtcaggttgag
gaacagttagtgtttgccaccagtctggacaccaccacgatggaggaggtccaggacttc
ctagaggagtcagttaaggggaactgtgaagggttgatggtgaaaacgctggagagcgat
gccacctacgagattgctaagcgatcccggaactggctgaagctgaagaaggactacctg
gacggggtgggtgacactctggacctggtggtggttgggggatatttcggcaaggggaag
cgggcaggactctacggaggtttcctgctggcctgttatcacccggacacggaggagtac
cagtctgtctgcaagctggggacagggttcagtgacgaggccttgcagaagcatacagaa
acgctgaagaagatggtgatcccgagtccaagaccgtacttccggtatgacacctcgcac
gagccggacgagtggttcgacgccaccgcggtgtgggaggtcaagtgcgccgacctctca
ctgtctcctgtccaccgagctgccgtcggcatcgttgatccagacaaggggatatcgttg
aggtttccccggtttatccgaatcagagacgacaaaactgcagaagaggccacctcagcg
caacagattgctgacatgtaccaaaatcaagaccaaattaaaaaccagcaaggcgactca
aataaaatcgcagaagaagatttttactaa

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