Homalodisca vitripennis (glassy-winged sharpshooter): 124369811
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Entry
124369811 CDS
T09217
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvi03041
]
124369811
03009 Ribosome biogenesis [BR:
hvi03009
]
124369811
Enzymes [BR:
hvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124369811
Spliceosome [BR:
hvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124369811
Ribosome biogenesis [BR:
hvi03009
]
Eukaryotic type
Pre-60S particles
Helicases
124369811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Transketolase_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
124369811
NCBI-ProteinID:
XP_046683884
EnsemblRapid:
LOC124369811
LinkDB
All DBs
Position
1:complement(116182768..116265212)
Genome browser
AA seq
918 aa
AA seq
DB search
MENELHIDGNESLRDCGDDDSESITDSPDDDEQKEDPLDLTVHCEPMFVELEEEKETDDN
RSLNLEEECVDPLEFLEVDQDSISESIESDEPSEAAIVEDTQLSHDGSHKDNVVHLSDEN
TQQTDKLQLLNDENKQAKLIHNSDGSSQQNHQSFNTNSMEKDMIKQDIIYDVIEECLPGK
PPVATMCKFQPSKRKNKKKKDFDPDFHFVGSTLEYNKDVWNDLTKYVKRNAKSKVDDKIL
KARKKLKEENEDSDEDLEVKQEVVSDGELSLSDDELKRDNIRNKEKNIGKKKKKKMKLLE
NNAEEKSEEFFEDAPPFDMNASFYQMNLSRPLLKAIGSMNFVTPTPIQAATIPVALAGRD
VCGCAATGTGKTAAYMLPTLERLLYRPRDATATTRVLVLVPTRELGVQVYQVSRQLAQFT
NIDIGLAVGGLDLKVQESVLRRSPDVVIATPGRLIDHLKNTPTFSLDSVEVLILDEADRM
LDEYFQEQMTEIIKQCARTRQTLLFSATMTDAVSDLAAVSLDKPVRVFVDNNQDVAFNLR
QEFVKIRKDKEADREALLAALVCRTFHDHTMVFVTTKKQAHRIHILLGLLGVKVGELHGN
LSQPQRLEALKRFKEEQVDVLVATDVAARGLDISGVKTVINFLLPPTLEHYIHRVGRTAR
AGRAGVSVSLAGENERKLVKQIVKRARNPVKSRVIPAEIVDKYRKKVARLEDEINKILHE
EWEERVMQRAENQANRAEKLLKEGGEEMPRSWFQSHKQRQEEKERLRLTEMKNEPGKSKE
VKGKEKEEKAPNEVQERPRQNKKKKKKHEESPEERVQQEMEKVMLLQARLAKKKRKPKKI
KTVVDSAFDGATGGRKRKQSSFEHELTDTSKKGVKRLRYEANKINKQEKFGKKHQKPQSA
FGKQKGKSYSNKSNFKKK
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgaactgcacattgatggaaatgagtcattacgggattgtggggatgatgac
agtgagagtattacagatagcccggatgatgatgaacagaaggaagatcccttggacctg
actgtccactgtgaaccaatgtttgttgagcttgaagaagagaaggagacggatgacaac
cgaagtctcaatttggaagaagaatgcgtagatcctttggaatttttggaagttgaccag
gactcaatctcggaaagcattgagagtgacgagccctcagaagcagcaatcgttgaagat
actcagctctcacatgatggatctcacaaggataatgtggtacacctctctgatgaaaat
actcaacagactgacaagctgcaactcctaaatgatgaaaataaacaggccaaacttata
cacaattcagatggcagttctcaacagaatcatcagagcttcaatacaaatagcatggaa
aaagatatgataaaacaagacattatttatgatgtgatagaggaatgcctcccagggaag
cctccagttgccacaatgtgcaagtttcagcctagcaagcgtaagaataagaagaaaaaa
gattttgatccagattttcattttgttgggagcacattagagtacaacaaagatgtgtgg
aatgatttaacaaaatatgtcaagcggaatgctaagtcaaaggtggatgataaaattctc
aaagcaaggaagaaactgaaagaagaaaatgaggacagtgatgaagacttagaagtgaaa
caagaagtggtgagtgatggtgaactgtcgctatctgacgatgagttaaaacgagataac
atcagaaacaaggaaaagaatattggcaagaaaaaaaagaagaaaatgaaactcttagaa
aataatgcagaagagaagagtgaagaattctttgaggatgctcccccatttgatatgaat
gcatcattttatcagatgaatctatcaagacctttgctaaaggcaataggatcaatgaac
tttgtgacgcccaccccaatccaggcagccactatcccagtggcattggctggccgagac
gtttgtggatgtgcagcgacaggcactggtaagactgcagcctacatgctacccaccctg
gagcgtctgttatacaggcctcgtgacgccactgccaccactcgagtgttggtgctggta
cccacaagagagctgggtgtccaggtgtaccaagtcagcaggcagctggcccagttcacc
aacatagatatcggactggctgtgggaggattggatctcaaagtacaggagtctgtactg
cgaaggagcccggatgtagtgattgccacacctggccgactgatagaccacctcaagaac
acccctaccttctccctagacagtgttgaggtgcttatactggacgaggcggacaggatg
ctagacgaatatttccaagaacagatgacggagataatcaaacagtgtgcacgaacacgt
cagacgttgctgttctctgccaccatgaccgatgcagtcagcgatctggcagcagtgtca
cttgacaagcctgtccgtgtgtttgtcgacaataaccaggatgttgccttcaatcttcgt
caggagtttgtgaaaatccggaaggataaagaagctgacagggaagctctattggcggcc
ctggtctgccgtacattccatgaccacactatggtttttgtcaccacaaagaaacaggcc
caccgcatccacatactacttggtctgcttggtgtcaaggtgggagagttgcatggaaac
ctgtctcagccgcagagactggaggctctgaagaggtttaaggaggaacaggtggatgtt
ctggtagccactgatgtagcagctcggggtctggatatctctggtgtcaaaactgtcatc
aacttcctgttaccacccactctggaacattacattcaccgtgtgggacgaactgcacga
gcgggtcgagctggagtgtcagtcagtcttgcgggtgagaatgaacgcaaactggtcaaa
cagatcgtcaagcgagcacgcaatccggtcaagagcagagtgatacctgcagaaattgtg
gacaagtatcgcaagaaggtggcaagactggaggatgagattaataagatccttcatgaa
gagtgggaggagagagtaatgcagagagcagagaaccaagctaatcgtgcagaaaaactg
ctcaaggagggaggagaagaaatgccccggtcatggttccagagccacaaacaacgccag
gaggagaaagaaagactgagactaactgaaatgaagaatgaaccaggcaagtcgaaggaa
gtgaaaggcaaagagaaagaagagaaagctccaaatgaagtacaagaaaggccacgccaa
aacaagaaaaagaagaagaagcatgaagagagccctgaggaaagagtccagcaggaaatg
gagaaggtcatgttgctgcaagcgagattggctaagaagaagcggaaaccaaagaaaatt
aaaacagtagttgacagtgcatttgatggagcaacaggtggaagaaagcgaaaacagtct
tcttttgagcatgaacttacagacaccagcaagaagggagtgaagcgtttacgatatgaa
gcaaacaagattaacaagcaagaaaagtttgggaagaaacatcagaaaccacaaagtgct
tttggtaaacagaaagggaaaagttattctaacaaatcaaactttaaaaagaaatag
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