Vreelandella venusta: EI420_05570
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Entry
EI420_05570 CDS
T05892
Name
(GenBank) outer membrane porin, OprD family
Organism
hvn
Vreelandella venusta
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Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AZM95192
UniProt:
A0A3Q8WCI6
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Position
1178377..1179783
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AA seq
468 aa
AA seq
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MLISSIPTPQKGQPLGRFGQLALIGTLSLVPLTSSADEPQGFMEEASLETTLFYIYRDRD
RRSGGMGPDGEGTPGAYASNLQHSTANLAVDFSSGHAGGVVGLDLAAFAAYDFQNRHQGT
EFNFRPASTLWEERWDGKETNGASLYRAALKFKVGDMWGRLGYLQPQGTSVIAPNWSFLP
GTYRGGELGARIGDLSLSYFHADRYKAPWYQSFYEFRQADGETIDYLHSLGARYDVTDDL
AIEAAFGQAHGYMDQGFGKVSYATQLNDSPLRLSYQTYAARDRHDDGSANDVYDGTAWQQ
VLTAHYDQGAFDWRLEFSWVHAPGSQGYFLPRMTTPYASSNGRLDIWWDARSDWNHDGEK
SLYAGVTYDLEGWDLPGWSLGLAHAYGWDARPYSGFEDPGRRFSESAWNFDVHYKVQNGW
AEGTRFQLHYTRYDNRTDYASWGDGGFKNAFQDEHDIKFTVVAPFSIL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgctgatatcaagcatacctacgccccaaaaagggcagccgttaggtcgctttggtcaa
ctagccctgatcggtaccttatcgttggttcctttgacatcttctgccgacgagccccag
ggctttatggaagaggccagccttgagaccaccctgttttatatctatcgcgaccgtgat
cgtcgttcgggaggtatggggccggatggcgagggcactccaggggcttacgcttccaat
ctgcagcactccaccgccaatctggctgtcgacttctcgagtggtcatgcggggggcgtt
gtggggctggatctagccgcctttgctgcttacgactttcagaaccgccaccagggcacg
gaattcaattttcgtccggcgagcactctgtgggaagagcgctgggacggtaaggaaacg
aatggtgcaagcctctatcgggccgcactcaagttcaaggttggcgatatgtgggggcgg
ttagggtatctgcagccccaaggtaccagtgtcatcgcccctaactggtccttcctgcca
ggcacttatcgcggtggagaacttggcgccaggataggtgacctatcgctgagctatttt
catgctgatcgttacaaggccccttggtatcagagcttctacgagttccgccaagctgat
ggagaaacgatcgactacctgcactcgctgggagcacgctacgacgtcaccgatgacttg
gccatcgaagcagcttttgggcaagcccatggctatatggatcaagggttcggcaaggtg
tcttatgctacccagctgaacgactccccgctgcgtttgagttaccaaacctacgccgcc
cgtgaccgccatgacgatggctcagccaacgacgtctatgacggtactgcctggcaacag
gtgcttaccgctcattatgatcagggggccttcgattggcggcttgagtttagctgggtg
catgcacctgggtctcagggctacttcctgcctcgaatgaccactccttatgcatcgtcc
aacggccgcttggatatctggtgggatgcccggtccgactggaatcacgatggtgaaaag
tccctctacgccggtgtcacctatgacctggaaggctgggatttgcctggttggtcactg
ggcttggctcatgcttatggctgggatgctcgtccctactcaggttttgaggaccccggg
cgccgctttagtgagtccgcctggaactttgacgtgcattacaaagttcagaatggctgg
gccgagggcacgcgttttcaacttcactatacccgctacgacaaccgcaccgactacgcc
tcctggggagatggcggctttaaaaatgcctttcaagatgagcacgacatcaagttcacg
gtcgtggctcctttctcgattctgtaa
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