Vreelandella venusta: EI420_09840
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Entry
EI420_09840 CDS
T05892
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
hvn
Vreelandella venusta
Pathway
hvn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EI420_09840 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvn03400
]
EI420_09840 (uvrB)
DNA repair and recombination proteins [BR:
hvn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EI420_09840 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EI420_09840 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF87
Kinesin
UB2H
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AZM95971
UniProt:
A0A3Q8WDY4
LinkDB
All DBs
Position
complement(2068541..2070565)
Genome browser
AA seq
674 aa
AA seq
DB search
MSKEFRLQSKFKPAGDQPAAIRSLVSGLESGLAHQTLLGVTGSGKTFTMANIVQQQQRPT
IVMAPNKTLAAQLYGEFKSFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERRDALIVVSVSAIYGLGDPDQYLKMRLHFTRGELIDQRAFLRRLAELQ
YTRNDMDFRRGTYRVRGDVIDIFPADSDEEAVRVELFDNEIDSIRLFDPLTGEVRTHVPR
MTIYPKSHYVTPRETILGAIDAIKAELKERLEWMRKHERLVEAQRLEQRTLYDIEMMLEL
GYCNGIENYSRYLSGRAPGEPPPTFFDYLPDDALLFIDESHVSVPQVGGMYKGDRSRKET
LVEYGFRLPSALDNRPMKFEEWESISPQTIFVSATPGKYEAEHASQIVEQVVRPTGLLDP
EIEVRPASTQVDDLLSEIGLRTAVGERVLVTTLTKRMAEDLTEYFDEHDIRVRYLHSDID
TVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGR
AARNAHGKAILYGDKITDSMRKAIDETERRRAKQTAHNQEHGITPTTVTRSVADILEAAQ
APGKKSSRRRGNERKVAESAAEYDVATMSKHDLLEAISKLEDAMFEAAQNLEFEEAARLR
DQLHQMQEKQLALG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaattccggctgcagtccaaatttaagcctgctggtgatcagcccgccgcg
atacgcagcctggttagtgggcttgagtcggggcttgcccatcagaccttattaggggtt
actggctcgggtaaaacgttcacgatggcaaatattgtgcagcagcagcagcgtccaacg
attgtaatggcgcccaataaaacgctggctgcccagctatatggtgagttcaaatcgttt
tttccggataacgctgtcgaatattttgtctcttactacgactattaccagccggaagcc
tatgtcccttcttcagatacctttattgagaaagatgcctcgataaatgaccatatcgag
caaatgcgcttatcggctaccaaggcactgcttgagcgtcgagatgcgctgattgttgtc
tcggtatcggcaatctatggtcttggtgatccagaccagtatctcaagatgcggttgcat
ttcacccgtggtgaattaattgaccagcgtgcttttttacgccgcttggccgaattgcaa
tatacccgcaacgatatggatttccgccgaggtacctatcgggtgcgcggcgatgtgatt
gatattttccccgcggactctgacgaggaagcggtgcgggtggagttgtttgataacgaa
attgattctatacgcttatttgatccattaactggcgaggtgcgaactcatgtgcctcgt
atgaccatctatcctaaatctcactatgtcactccgcgagaaactattttaggcgctatt
gatgcaatcaaggcagagcttaaggagcgccttgagtggatgcgtaagcacgagcgttta
gttgaagcacagcgcctagagcagcgaaccctttacgatattgaaatgatgctagagctt
ggctactgcaacggcattgaaaactactcgcgctatctttcaggtcgtgcgcctggcgaa
ccacccccgacgttcttcgactatctgccggatgacgcgttactgtttatcgatgagtcg
catgtcagtgtgccccaggttggcggtatgtataagggcgaccgttctagaaaagagaca
ctggttgaatatggcttccggctaccctctgcgctagataaccggccaatgaaatttgaa
gagtgggaatctatttcgcctcaaaccatctttgtgtcggcaacaccgggcaagtatgaa
gcagaacatgccagtcaaattgtcgagcaggtggtgcgcccaacaggcttgttagatccg
gaaatagaagttcgcccggccagtacccaggttgatgacctgctgtcagaaattggctta
cgtactgccgtaggtgagcgtgttctggtgacgacgctgactaaacgtatggcggaagat
ctaaccgagtactttgatgagcacgatatccgtgtgcgctatttacattcggatattgat
accgttgagcgagtcgaaatcatccgcgacctgcgtcttggtaagttcgatgttttagtg
ggaatcaacttacttcgggaaggcttagatattcctgaagtgtcgcttgttgccatcttg
gatgccgataaagagggctttttacgcgctgagcgctcactgattcaaactattggccgt
gcagcccgtaacgcccatggtaaagctattttatacggtgacaaaatcaccgattcaatg
cgcaaagccatcgatgaaaccgaacgtcgccgcgccaagcagaccgctcataaccaagag
catggcatcacgccaaccaccgtaacgcgctctgtggcggatattcttgaagctgcccag
gcaccaggcaagaagagcagccgtcgccgtggcaacgagcggaaagtggcagagagtgct
gctgaatatgatgtggccacgatgagcaaacacgatctgctcgaggctataagtaagcta
gaggacgccatgtttgaagctgcacaaaatctagagtttgaagaagcagcgagactgcgt
gatcagcttcatcaaatgcaagaaaaacagctggcgctggggtaa
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