Haloferax volcanii: HVO_0552
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Entry
HVO_0552 CDS
T01200
Symbol
mutS1b
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hvo
Haloferax volcanii
Pathway
hvo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HVO_0552 (mutS1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvo03400
]
HVO_0552 (mutS1b)
DNA repair and recombination proteins [BR:
hvo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HVO_0552 (mutS1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
T3SS_SCTL
AAA_27
AAA_14
NFACT_N
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ADE04510
UniProt:
D4GSE9
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All DBs
Position
complement(483354..486128)
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AA seq
924 aa
AA seq
DB search
MTTQGIVGQFLSLKEETDADLLAMQCGDFYEFFADDAETVGRELDLKVSQKSSHGSSYPM
AGVPLNDLTPYLKALVERGYRVAVADQYETESGDLRREVKRVVTPGTLLETSRADAQFLA
AVVTDGDGVGLAFSDITTGQFLVTEAATVDDAAAELYRFAPVEVLPGPELRSDDETLSRL
REATDASFSLFATEAFAPGRARHAVREQFGASTVDSVGLDSDLATRAAGGVLAYVEETGA
GVLRSMTRLQVYHPSDLLELDATTQRNLELTETMHGDRSGSLFDTIDHTVTSPGGRLLRE
WLTRPRRDRDELARRHDAVESLASAALARERVREVLDGAYDLERLASRSASGSAGASELL
SVRDTLSVLPALADAIEGTELADSPLAEVVSRPDRDAAADLRTDLADALAEDPPKTVTQG
GLFQTGYDDELDDLIERHESAKSWLDTLADREKRDHGLSHVTVDRNKTDGYYIQVGKSVA
DQVPDHYRQIKTLKNSKRFVTEELEEKEREILRLEEARGDLEYELFEDLRERVARHAELL
QDVGRTIAEVDALASLATHAAGNGWTRPELTEAGALDIEAGRHPVVETTTDFVPNDLRMD
DERGFLIVTGPNMSGKSTYMRQAALITLLAQVGSFVPARSATVGVVDGIYTRVGALDELA
QGRSTFMVEMQELSNILHSATEDSLVILDEVGRGTATYDGISIAWAATEYLHNEVRAKTL
FATHYHELTSLADHLDRVANVHVAADERDGDVTFLRTVVDGPTDRSYGIHVADLAGVPRP
VVDRAGDVLDRLREEKAIEAKGSGTSEPVQAVFDVGSGQMKVAEAGDSGGDGDDSAGSGA
PANGATGTGAAGNGSVDAAAAVEGSAEADRAGTGSDSEAEAALDPETEAVLDELQSTDVN
DTSPLDLMAKVQAWQSKLDGGDGE
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgactactcagggaatcgtcggacagttcctctcgttgaaagaggagaccgacgccgac
ctgctcgccatgcagtgcggcgacttctacgagttcttcgccgacgacgccgagacggtc
ggccgcgaactcgacctcaaagtctcccagaagtcctcgcacgggtcgtcgtacccgatg
gcgggcgtgccgctgaacgacctgacgccctacctcaaggcgctcgtcgagcgcggctac
cgggtcgccgtcgccgaccagtacgaaaccgagtccggcgacctccgccgggaggtaaag
cgcgtcgtcacgccgggcacgctcctcgaaacctcccgcgccgacgcgcagttcctcgcg
gccgtcgtgaccgacggcgacggtgtcggcctcgcgttctccgacatcacgaccggccag
ttcctcgtcaccgaggccgcgaccgtcgacgacgccgcggccgaactctaccgcttcgcc
cccgtcgaggtcctccccggcccggaactgcggagcgacgacgagacgctctcgcggctg
cgcgaggccaccgacgcctccttctcgcttttcgccaccgaggcgttcgcgccgggtcgc
gcccgccacgccgtccgcgagcagttcggcgcgtcaacggtcgatagcgtcggcctcgac
tccgacctcgcgacccgcgccgccggcggcgtcctcgcctacgtcgaggagacgggcgcg
ggcgtcctccggtcgatgacgcgcctccaagtctaccacccgtcggacctgctcgaactc
gacgcgaccacccagcgcaatctcgaactcacggagacgatgcacggcgaccgctcgggg
tcgctgttcgacacgatagaccacaccgtcacctcgcccggcggccgcctcctccgcgag
tggctgactcgaccgcgacgcgaccgcgacgaactcgcccgccgacacgacgccgtggag
tcgctcgcgtcggccgccctcgcccgcgagcgcgtccgcgaggtgctcgacggggcgtac
gacctcgaacgcctcgcctcccggtcggcgtccgggagcgccggcgcgtcagagctgctt
tcggtccgcgacacgctctcggtgcttcccgccctcgccgacgccatcgaggggaccgaa
ctcgcggactccccgctcgcggaagtcgtctcgcggcccgaccgagacgccgcggccgac
ctccggacggacctcgccgacgcgctcgccgaggacccgccgaagacggtcacgcaaggc
ggcctgttccagacgggctacgacgacgaactcgacgacctcatcgagcgccacgagtcg
gcaaagtcgtggctcgacacgctcgctgaccgcgaaaagcgggaccacggcctctcgcac
gtcaccgtcgaccgcaacaagaccgacggctactacatccaggtcggcaagtcggtcgcg
gaccaagtgccggaccactaccggcagataaagacgctcaagaactccaaacgcttcgtc
accgaggagttagaggagaaagaacgcgagattctccggctcgaagaggcccgcggcgac
ctcgaatacgaactgttcgaggacctccgcgagcgcgtggcccggcacgccgaactcctc
caagacgtgggccggaccatcgccgaggtggacgcgctggcgtcgctcgccacccacgcc
gccggcaacgggtggacgcgccccgaactcaccgaggccggagcgctcgacatcgaggcc
ggtcgccacccggtcgtggagacgacgaccgacttcgtcccgaacgacctccgcatggac
gacgagcgcggcttcctcatcgtcaccggaccgaacatgtccggcaaatcgacgtacatg
cggcaggcggcgctcatcacgctcctcgcgcaggtcggcagtttcgtgcccgctcgctcc
gcgaccgtcggcgtcgtcgacggcatctacacccgcgtcggcgcgctggacgaactcgcg
cagggccgctcgacgttcatggtcgagatgcaagagctctcgaacatcctccactcggcc
accgaggactcgctcgtcatcctcgacgaggtgggccgcggaaccgcgacctacgacggc
atctccatcgcgtgggcggccaccgagtacctccacaacgaggtgcgcgcgaagacgctg
ttcgccacgcactaccacgaactgacgagcctcgcggaccacctcgaccgcgtcgccaac
gtccacgtcgcggccgacgagcgcgacggcgacgtgacgttcctcagaaccgtcgtcgac
ggcccgaccgaccggagctacgggattcacgtcgcagatttggcgggggttccgcgcccg
gtggtcgaccgcgccggcgacgtgctggaccgactccgcgaggagaaggcaatcgaggcg
aagggctccggcacctcggagcccgtgcaggccgtcttcgacgtggggagcggccagatg
aaggttgccgaagccggcgactctggcggcgacggcgacgattcggctggctccggcgcg
cccgcgaacggcgcgactggaacgggtgcggccggcaacggctcggtggacgcggccgcg
gccgtcgaagggagtgctgaagcggaccgcgccgggaccgggtccgactccgaggccgag
gccgcgctggacccggagacggaagccgtcctcgacgaactgcaatcgaccgacgtgaac
gacacgtcgccgctggacctgatggcgaaggtgcaggcgtggcagtcgaaactcgacggc
ggtgacggcgaatga
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