Haloquadratum walsbyi DSM 16790: HQ_1003A
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Entry
HQ_1003A CDS
T00375
Symbol
polD1
Name
(GenBank) DNA-directed DNA polymerase D exonuclease subunit DP1
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
hwa
Haloquadratum walsbyi DSM 16790
Pathway
hwa03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HQ_1003A (polD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hwa03032
]
HQ_1003A (polD1)
Enzymes [BR:
hwa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HQ_1003A (polD1)
DNA replication proteins [BR:
hwa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
HQ_1003A (polD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
Metallophos_2
tRNA_anti-codon
Colicin_M
Ndc1_Nup
Motif
Other DBs
NCBI-ProteinID:
CAJ51133
UniProt:
Q18DI9
LinkDB
All DBs
Position
3557..5179
Genome browser
AA seq
540 aa
AA seq
DB search
MPSELSARIVSALAQHGYNADREAVTLLAGAKYPNTALEEVLDLIADDTLRITAADVRPV
IDSTPSDPSSITEPANKDSTRDNNAQDQSISDQKTEYLPSQSNSPNDVTPDLDSSPEQTT
GASQPPQKAHTSTPETNQSVNSFDINGDITGRSTGTGSYDDFVSVFRDRYERLSSHLRSR
VNHRPTQAIGSMSGETDTAIIGLVNDIRSTKNGHWIVELEDTTGTFPCLVMKDRSFADVV
NELLFDECIAIEGTLSGDGEILFANDIHFPDIPHNHTPNTADRHVQAALISDIHVGSQEF
VYDAWERFAAWLHTDEADAIEYLLIAGDMVEGVGVYPDQDDELDIVDIYAQYETFAEHLK
SVPGDIEILLIPGNHDAVRLAEPQPGFDDELRSIMSAHDARISGNPSFVTIEGVQILMYH
GVSLDEVIAELPSPKANYDEPHKAMYQLLKKRHIAPQFGERTRLAPEDSDYLIIDEIPDV
FHTGHVHKLGWGKYHDVLAVNSGCWQAQTAFQRSVNIDPDVGYAPIIDLDTLEMTVRKFL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
gtgccttcggagttatcggcgcgtatcgtttccgcacttgcacagcatggatataatgca
gatcgtgaagctgttacactccttgcgggtgctaaatatcctaatactgcactcgaagag
gtgttagatttaatcgcggatgatacgcttcggattactgctgctgatgttcgccctgtg
attgactcaacaccatcagatccttcaagcataaccgaacccgcgaacaaagactcgaca
agggataataatgcccaagatcagagtatatccgatcaaaagacagaatatctcccgtcc
cagtcaaattctccgaatgatgtaacacctgatttagattcatcaccggagcaaaccacg
ggtgcgtcacaaccacctcaaaaggctcatacatcaacaccagagacaaatcaatctgta
aattcatttgatatcaatggtgacattaccggacgaagcacaggcaccggatcatacgat
gactttgtgtcggtttttcgagaccgctatgagcgtctgtcatcacaccttcggagccgt
gtcaaccatcgacctacacaagctattggttcaatgtctggcgaaacggatacagcgatt
atcgggttagttaatgatattcgatcgacaaaaaatggtcactggattgttgaactggaa
gatacaacaggtacatttccgtgtcttgtgatgaaagaccggtcattcgctgatgttgtt
aatgaactattgtttgatgagtgtattgcaattgaaggcacactttcgggagatggagaa
atactctttgcgaacgatattcacttccctgacattccgcataatcataccccaaatact
gctgacaggcatgttcaagcggcgctcatttctgacatccacgttgggagtcaagaattc
gtttatgatgcctgggagcgatttgctgcatggcttcacacagacgaggccgacgctatt
gagtatttgctgattgcgggtgatatggttgaaggtgttggagtgtatcctgatcaggat
gatgaacttgatattgttgatatttatgcgcagtatgaaacgtttgctgagcatctcaag
tctgtccctggcgatattgaaattcttctgatacccggaaatcacgacgctgtcaggctt
gctgagccacaacctggatttgatgatgaactccgttcaatcatgtcagcacatgatgca
cgtatctctggaaacccttcatttgtcaccattgagggcgttcagatattgatgtatcac
ggcgtttctcttgatgaagttattgctgaactcccatcaccgaaggcaaattatgatgaa
cctcacaaggcgatgtatcagctattaaaaaaacgacatatcgctcctcaatttggtgag
cggacacgtctcgcacctgaagatagtgattacttaataatcgatgaaatcccagatgtg
tttcataccggtcacgtgcataagcttggctggggaaaatatcatgatgtgcttgcagtg
aactctggatgttggcaggcacagacagcatttcagcggtcggtgaatattgatcctgat
gtagggtatgcgccaattatcgatctagatacgcttgaaatgactgttcgcaaattcctg
tga
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