Haloquadratum walsbyi DSM 16790: HQ_1625A
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Entry
HQ_1625A CDS
T00375
Symbol
tfbA3
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hwa
Haloquadratum walsbyi DSM 16790
Pathway
hwa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hwa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HQ_1625A (tfbA3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hwa03021
]
HQ_1625A (tfbA3)
Transcription machinery [BR:
hwa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HQ_1625A (tfbA3)
Prokaryotic type
Archaeal type
TFB
HQ_1625A (tfbA3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Cyclin_C
HTH_Tnp_ISL3
Cyclin_N
Sigma70_r4
Sigma70_r4_2
Auto_anti-p27
Zn_Tnp_IS1
Zn_Tnp_IS1595
Ribosomal_S27e
Trm112p
Motif
Other DBs
NCBI-ProteinID:
CAJ51753
UniProt:
Q18JQ1
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Position
complement(762151..763260)
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AA seq
369 aa
AA seq
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MSDSLHARTRETEDDEQSDGRTWRDHSTTSERRGTRNSSKTTGSDESTTEQTSDESSTVE
ETVHCPECESTELITDDERGETVCADCGLVVDEDSIDRGPEWRAFDSAERDQKSRVGAPT
TKLMHDKGLSTNIGWQDKDAYGNSLSSTQRQKMQRLRTWNERFRTRDSKERNLKQALGEI
DRMASALGLPESVRETASVIYRRALDEDLLPGRSIEGISTAALHAAARMAQVPRSIDEVA
RVSRVDEDEFERAYRYIVRELSLEIQPADPAEYVPRFASDLEVPKETERTARELLESAKR
QNVHSGKSPVGLAAAALYASAQLTNDELTQADVSEVTDISEVTIRNRYQELLEAWDNRSN
GSGADAASA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactcccttcacgcgcgcacgcgcgagactgaggacgatgagcaaagtgatggt
cgtacgtggcgagatcatagtacgacatctgaacgccgaggtacgcggaatagctcgaaa
actaccggatcagatgaatcgacaacagaacaaactagcgatgaatcctcaacagttgag
gagacagtccattgtccagagtgtgagtcgacagaactgatcaccgatgatgagcgtggt
gagacagtctgtgcagactgtggacttgttgttgatgaggattcaattgatcgtggacca
gagtggcgcgctttcgatagtgctgagcgtgatcaaaagtctcgtgttggtgctccaacg
acgaaattgatgcatgacaaggggctctcgacaaacattggctggcaagacaaagacgca
tacggaaactccctgtcatcaacgcagcgacagaagatgcaacggcttcgaacatggaat
gagcggttccggactcgtgactcaaaagaacggaacctcaagcaggcacttggcgagatt
gaccgaatggcctctgcgcttggacttccagagagcgttcgtgaaactgcatctgtaatt
taccgtcgagcccttgatgaggatcttctgcctggtcgatcgattgaaggcatttccaca
gcggcattgcacgccgccgcacgaatggcacaagtcccccgaagtatcgatgaagtcgct
cgcgtctctcgggttgatgaggatgaatttgaacgagcatatcgatatattgtccgtgaa
ctctcattagagattcaaccggctgatcctgccgagtatgtcccccggtttgcttctgat
cttgaagtgccgaaggagaccgaacggacggctcgagaattactcgaaagcgcaaaacgt
caaaatgtgcattccggaaagtcaccggttggacttgctgcagcagctctgtatgcatcc
gcacaattgacgaatgatgaactcacgcaagctgatgtgagtgaggtaacagacatctca
gaggtaaccattcgaaaccgatatcaagagttgctcgaggcatgggataaccgatccaat
ggatccggtgctgacgcggcgagtgcataa
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