Halopiger xanaduensis: Halxa_3683
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Entry
Halxa_3683 CDS
T01532
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hxa
Halopiger xanaduensis
Brite
KEGG Orthology (KO) [BR:
hxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hxa03032
]
Halxa_3683
03400 DNA repair and recombination proteins [BR:
hxa03400
]
Halxa_3683
Enzymes [BR:
hxa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Halxa_3683
DNA replication proteins [BR:
hxa03032
]
Prokaryotic type
DNA Topoisomerases
Halxa_3683
DNA repair and recombination proteins [BR:
hxa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Halxa_3683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
HHH_5
Cdd1
DNA_pol_lambd_f
DUF4332
Motif
Other DBs
NCBI-ProteinID:
AEH38291
UniProt:
F8DBM4
LinkDB
All DBs
Position
complement(3005173..3007653)
Genome browser
AA seq
826 aa
AA seq
DB search
MELIITEKDNAARRIADILSGGTYDSSRENGVNVYEWGGKRCVGLSGHVVGVDFPDEYSD
WRDVEPAELIDADVEKTATKENIVATLRIFARKATSVTIATDYDREGELIGKEAYEIVRD
VNEDVPIRRVRFSSITENEVQEAFENPDDLDFDLAAAGEARQIIDLVWGAALTRFLSLSA
GQLGNDFISVGRVQSPTLKLIVDREREIQAFDPEDYWELFADLAKDDTTFESQYFYRDED
DNEAERVWEEAAAEEVYDTLSQRDSATVVDVNRRTRTDAPPTPFNTTQFIRAAGALGYSA
QRAMSIAEDLYTAGYITYPRTDNTVYPDDLDPEELLDDFVGHPTLGESAEDLLEADEIQP
TEGDEETTDHPPIHPTGEIPARGDVSDDEWEIFELVVRRFYATVAEAAVWEHLKVVSEVE
DYRLKANGKRLVEPGYHDVYPYFSTAENYVPDVEEGEELALSDVELEEKQTQPPRRYGQS
RLIETMEDMGIGTKSTRHNTLEKLYDRGYIESDPPRPTKLAMAVVDAAENYADRVVSEEM
TAQLEADMDAIASGEAGLEDVTDESREMLEEIFANLAESREEIGDHLRKSLKDDKRLGPC
PECGEDLLVRNSRHGSYFIGCDGYPDCENTLPLPSTGKPLILESECEEHGLNEVKMLAGR
QTFVHGCPLCKAEDAGEGPVLGECPDCGEEHDGDLAVKTLQSGSRLVGCTRYPDCEYSLP
LPRRGEIEVTDERCDEHDLPELVVHSGDEPWELGCPICNYQEFQARESDSGSDLEALDGL
GAKTVEKLADAGIESIDDLTEADPDAVAEDVDGVSADRIRNWQAEA
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
gtggaactgatcatcaccgagaaggacaacgccgcgcgacggatcgccgacatcctctcc
ggcggcacgtacgactcgagccgcgagaacggcgtcaacgtctacgagtggggcggcaag
cgctgcgtcgggctgtcgggccacgtcgtcggcgtcgacttccccgacgagtactccgac
tggcgcgacgtcgagcccgccgaactcatcgacgccgacgtcgagaagacggcgacgaag
gagaacatcgtcgcgaccctgcgcatcttcgcccgcaaggcgaccagcgtgacgatcgcg
accgactacgaccgcgagggcgaactcatcggcaaggaggcctacgagatcgtccgcgac
gtcaacgaggacgtcccgatccgtcgggtgcggttctcctcgatcaccgaaaacgaggtg
caagaagccttcgagaaccccgacgatctggacttcgacctcgcggccgccggcgaggcc
cgccagatcatcgacctcgtctggggcgccgcgctgacccgcttcctctcgctgtctgcg
ggccaactgggcaacgacttcatctccgtcgggcgggtccagtcgccgacgctgaagctg
atcgtcgaccgcgagcgcgagattcaggcgttcgatcccgaggactactgggaactgttc
gcggatctcgcgaaggacgacaccaccttcgagtcccagtacttctaccgcgacgaggac
gacaacgaggccgagcgcgtctgggaggaggccgccgccgaggaggtttacgacaccctc
tcgcagcgcgattcggccaccgtggtcgacgtcaaccgccgaacgcgcaccgatgcgccg
ccgaccccgttcaacaccacccagttcatccgcgcggccggcgccctgggctactccgcc
cagcgggcgatgtcgatcgccgaggacctctacacggccggatacatcacgtacccgcgg
acggacaacaccgtctaccccgacgacctcgatcccgaggaactgctcgacgacttcgtc
ggccatccgacgctgggcgagtccgccgaagacctgctcgaggccgacgaaatccagccg
acggaaggtgacgaggagacgaccgaccacccgccgatccacccgaccggcgagatcccc
gcccggggcgacgtgagcgacgacgagtgggagatcttcgaactcgtcgtccggcgtttc
tacgcgaccgtcgccgaggccgcggtctgggagcacctcaaggtcgtcagcgaggtcgag
gactaccgcctgaaggcaaacggcaagcgcctcgtcgagcccggctaccacgacgtctac
ccgtacttctccaccgcggagaactacgtccccgacgtcgaggaaggcgaggaactcgcg
ctctccgacgtcgaactcgaggagaagcagacccagccgccccgccggtacggccagtcg
cggctcatcgagaccatggaggacatgggcatcgggacgaagtcgacccgtcacaacacc
ctcgagaaactgtacgatcggggctacatcgagagcgatccgccgcgaccaacgaagctc
gcgatggccgtcgtcgacgcggccgagaactacgccgaccgcgtcgtcagcgaggagatg
acggcccaactcgaggccgacatggacgccatcgcctccggcgaagcagggctcgaggac
gtcaccgacgagtcccgggagatgctcgaggagatcttcgcgaacctcgccgagtcgcgc
gaggagatcggcgaccacctccgaaagtcgctcaaggacgacaagcggctgggtccctgc
cccgagtgcggcgaagacctgctcgtgcgcaacagccgccacggctcctacttcatcggc
tgcgacggctaccccgactgcgagaacacgctgccgctgccctcgacgggtaagccgctc
attctggaaagcgagtgcgaggagcacggcctgaacgaggtcaagatgctcgccggccgg
cagacgttcgtccacggctgcccgctctgtaaggccgaagacgccggcgaagggcccgtg
ctgggcgagtgtccggactgcggcgaggagcacgacggcgacctcgcggtcaagaccctc
cagagcggctcgcggctggtcggctgcacccgctaccccgactgcgagtactcgctgccc
ctgccgcggcgcggcgagatcgaagtcaccgacgagcgctgcgacgaacacgacctgccc
gaactcgtcgttcacagcggcgacgagccgtgggaactgggctgtccgatctgcaactat
caggagttccaggcccgcgagagcgactcgggatcggatctcgaggcgctcgatggcctc
ggtgcgaaaacggtcgagaagctcgccgacgcgggcatcgagagtatcgacgacctgacc
gaggccgatccggacgccgtcgcggaggacgtcgacggcgtcagcgccgaccggattcgc
aactggcaggccgaagcctga
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