KEGG   Hydrogenophaga sp. PBC: Q5W_02810
Entry
Q5W_02810         CDS       T04491                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hyb  Hydrogenophaga sp. PBC
Pathway
hyb02024  Quorum sensing
hyb03060  Protein export
hyb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hyb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Q5W_02810
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Q5W_02810
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Q5W_02810
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hyb02044]
    Q5W_02810
Enzymes [BR:hyb01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Q5W_02810
Secretion system [BR:hyb02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Q5W_02810
  Eukaryotic Sec-SRP protein
   Q5W_02810
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA AAA_22 AAA_30 APS_kinase AAA_16 AAA_33 cobW AAA_31 nSTAND3 AAA_19 DO-GTPase1 AAA_17 AAA_18 AAA_24 AAA_28 AAA_14 Thymidylate_kin ResIII GTP_EFTU YqeC ArsA_ATPase Helicase_RecD TsaE HTH_Crp_2 SLFN-g3_helicase AAA 6PF2K KTI12
Other DBs
NCBI-ProteinID: AOS77990
LinkDB
Position
561262..562659
AA seq 465 aa
MASALSDRLSRIVKEMRGQARITESNVSDMLREVRMALLEADVALPVVRDFIARVKEKAL
GADVVGSLTPGQALVGIVNRELAATMGGAGPEGSAARPVVDLNLAAQPPAVILMAGLQGA
GKTTTTAKLARHLIEKRKKKVLTVSGDVYRPAAIEQLKTVTAQAGAEWFPSTPEQKPADI
ARAALDHARRHHFDVLLVDTAGRLAIDEALMREIRELHAVLNPVETLFVVDAMQGQDAIN
TAKAFKEALPLTGIVLTKLDGDSRGGAALSVRAITGAPIKFAGVSEKIDGLEVFDAERHA
QRVLGMGDIVALVEQVTAGVDMASAQKLAAKVKSGEGFDLNDFLDQLRQMKQMGGLSNLL
DKLPAQMAAKAGEADLSRAEKDIRRKEGIICSMTLAERRKPEIIKATRKRRIAAGAGVHV
QEVNRLLKEFEQMQGMMKKMKGGGLMKMMKRMGGMKGMPKLPGMG
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggcctcagccctgtccgaccgcctgtcacgcatcgtcaaggaaatgcgcggccaggcc
cgcatcaccgagagcaacgtgagcgacatgttgcgcgaggtgcgcatggccttgctcgag
gccgacgtggccttgccggtggtgcgcgacttcatcgcccgtgtgaaagagaaggcgctg
ggcgcggacgtggtgggctcgctcaccccggggcaggcgttggtgggcatcgtcaaccgc
gaactcgccgcgaccatgggcggcgcgggcccggaagggtcggctgcgcgtcccgtggtc
gacctcaacctcgcggctcagccgcccgccgtgattctcatggccggcctgcagggcgcc
ggcaagaccaccaccaccgccaagctggcgcggcacctgatcgagaagcgcaagaagaag
gtgctcaccgtttcgggcgacgtttaccgccctgccgccatcgagcagctcaagaccgtg
accgcccaagccggcgccgagtggttcccgagcacacccgagcagaaacccgccgacatc
gcgcgcgccgcgctcgaccacgcgcgccgccaccacttcgacgtgctgctggtcgacacc
gctggccgccttgccatcgacgaggcgctgatgcgcgagatccgcgagctgcacgcggtg
ctgaacccggtggagacgctcttcgtcgtcgacgccatgcaaggccaggacgcgatcaac
accgccaaggctttcaaggaagcgctgccgctcaccggcatcgtgctcaccaagctcgac
ggcgactcgcgcggcggcgcggcgctgtcggtgcgcgccatcacgggcgcgccgatcaag
ttcgccggcgtgtcggaaaagatcgatggcctggaggtcttcgacgccgagcgccacgcg
cagcgcgtgctgggcatgggcgacatcgtggccctggtcgagcaggtcactgccggcgtg
gacatggcctcggcccagaagctcgcggccaaggtcaagagcggcgagggctttgatctc
aacgacttcctcgaccagttgcgccagatgaagcagatgggcggcctgtccaacctgctc
gacaagctgcccgcgcagatggcggccaaggccggcgaagccgacctctcgcgcgccgag
aaggacatcaggcgcaaggaggggatcatctgcagcatgaccctggccgagcgccgcaag
cccgagatcatcaaggccacgcgcaagcgtcgcattgccgccggtgcgggtgtgcacgtg
caggaggtcaaccgcctgctcaaggaattcgagcagatgcagggcatgatgaaaaagatg
aagggcggcggcctcatgaagatgatgaagcgcatgggcggcatgaagggcatgcccaag
ctgcccggcatgggctga

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