Hydrogenophaga sp. PAMC20947: E5678_10005
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Entry
E5678_10005 CDS
T05960
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc00521
Streptomycin biosynthesis
hyc00523
Polyketide sugar unit biosynthesis
hyc00541
O-Antigen nucleotide sugar biosynthesis
hyc01100
Metabolic pathways
hyc01110
Biosynthesis of secondary metabolites
hyc01250
Biosynthesis of nucleotide sugars
Module
hyc_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
E5678_10005 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
E5678_10005 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
E5678_10005 (rfbC)
Enzymes [BR:
hyc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
E5678_10005 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QCB46326
UniProt:
A0A4P7R8W2
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All DBs
Position
2241552..2242097
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AA seq
181 aa
AA seq
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MKATPLAIPDVILFEPKVFGDDRGFFFESFNQAKFEEAVGRPVHFVQDNHSKSTKGVLRG
LHYQIQQPQGKLVRASQGAVFDVAVDLRKSSPTFGQWVGAHLSAENKAQLWVPEGFGHGF
VVLSETAEFLYKTTDYYAPAFERSILWNDPDLAIDWTTDLAPVLSAKDQSASTLKSADLF
D
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctacccctctggccattcccgacgtcatcctctttgagcccaaagtgttcgga
gatgaccgcggtttctttttcgagagcttcaaccaggccaagtttgaagaagctgtcggc
cgtcctgtgcacttcgttcaagacaaccactccaagtccaccaagggcgttcttcgcggt
ctgcactatcagattcagcagccccagggcaaactcgtgcgcgcatcacagggcgctgtt
tttgatgtcgcggtggacctgcgaaagtcgtccccgacctttggtcaatgggttggcgcg
catctgagcgccgagaacaaggcgcaactgtgggtacccgagggctttggtcacgggttt
gtggtgctgagtgaaaccgctgagttcctgtacaagaccaccgactattacgcgcccgct
ttcgagcgcagcatcctttggaatgacccagatctggcgatcgactggacgaccgacctg
gcccccgtgctttcggccaaagaccagtcggcctcaacactcaagtcagccgaccttttc
gattga
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