Hymenobacter oligotrophus: D3Y59_03335
Help
Entry
D3Y59_03335 CDS
T05656
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hyh
Hymenobacter oligotrophus
Pathway
hyh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D3Y59_03335 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyh03019
]
D3Y59_03335 (recQ)
03400 DNA repair and recombination proteins [BR:
hyh03400
]
D3Y59_03335 (recQ)
Enzymes [BR:
hyh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D3Y59_03335 (recQ)
Messenger RNA biogenesis [BR:
hyh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D3Y59_03335 (recQ)
DNA repair and recombination proteins [BR:
hyh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D3Y59_03335 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
HTH_40
Helicase_C
RecQ_Zn_bind
HTH_24
HTH_IclR
ResIII
GerE
Sigma70_r4_2
HTH_5
MarR_2
HTH_7
HTH_23
LexA_DNA_bind
HTH_45
HTH_35
HTH_28
HTH_20
HTH_Tnp_ISL3
TniB
HTH_PafC
RPA_C
zf-CXXC
HTH_11
GARS_N
Motif
Other DBs
NCBI-ProteinID:
AYA36180
UniProt:
A0A3B7QYL8
LinkDB
All DBs
Position
799375..801624
Genome browser
AA seq
749 aa
AA seq
DB search
MLFATEPLAPTLDSARRVLKQYYGYDSFRPMQQDIIQSILGGRDTVVLMPTGGGKSVCFQ
VPAMVQEGVCVVVSPLIALMKDQVEALKANGIAAACINSSVGQAEQNSIGRACQAGALKL
LYVSPEKLLSEGFLSFLKRIQVSMFAIDEAHCISSWGHDFRPEYTQLRVLREQFPEVPII
ALTATADRLTQRDIQQQLRLNDPQVFLSSFDRPNLSLNVRPGQDRVNGIINYVKQRPTEP
GIVYCLSRKQCETLAGKLKEKGFRAGFYHAGMTDRARSEVQEQFLRDDLQIICATVAFGM
GIDKSNVRWVIHYNLPKNIEGYYQEIGRGGRDGAPAEAVLFYSYADVAQLRDMITKDADP
RLAQLNTTKLERMQQFAEAASCRRRILLAYFGEVLDKDCGNCDICRNPPVTFDGTELAQK
ALSAVARTREQAPLTLIADVLLGRRNQAVIGRGYDQIKTFGAGANLSFLDWQSYLHQLLN
DGLLYIAYEQGYALKLTDLGWQVLKGERKQQLKQFQVPAKAEKAPKGRAAKAAAGPRLVS
VTDDLFDRLRQLRKRIADQQGVPPYVVFSDTTLQEMAVERPRTRTAMLAISGVGMKKFET
YGEQFIQLINELAGAPSPDDVPDLGADDDVSAAPKKRPAPGSTFVDSWKLHRQGLSVEQV
AEQRGLSPSTVKSHLETLYEKGYQLRTEEFLTMDDFAQIKMAAQELGPELRLRDLFDHLR
ERYDYFQLRLALIYDKRMRGELPTQPVDA
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgttatttgctaccgaacccctcgcacctacgctcgattcggctcgccgcgtgctcaag
cagtactacggctacgactcgttccggcccatgcagcaggacatcatccagagcatccta
ggagggcgcgatacggtggtgctgatgcccacgggcgggggcaaatcggtgtgctttcag
gtgccggccatggtgcaagagggcgtgtgcgtggtggtgtcgccgctgattgccctgatg
aaggaccaggtggaagctctgaaagccaacggcatagcggccgcttgcatcaacagcagc
gttggccaggccgagcaaaacagcattgggcgggcgtgccaggccggcgcgcttaagctg
ctgtacgtatcgcccgaaaagctcctctccgaaggttttctgagctttctgaaacgcatt
caggtgagcatgtttgccatcgacgaggcgcactgcatttcgtcgtggggccacgatttc
cggcccgaatacacgcaactgcgggtgctgcgcgagcaatttccggaggtgcccattatt
gcccttacggccaccgccgaccgccttacccagcgcgacattcagcagcaactgcgcctg
aacgacccgcaggtgttcttgtcgtcgttcgataggcccaatttgtcgctgaacgtgcgc
ccgggccaggaccgcgtaaacggcatcatcaactacgtgaagcagcggcccaccgagccg
ggtattgtgtattgcctttcgcgcaagcagtgcgaaaccctagcgggcaagctcaaggaa
aaaggctttagggccggcttttaccacgccggcatgacggaccgcgcccgctccgaggtg
caggagcagtttctgcgcgacgacctgcagatcatttgcgccacggtggccttcggcatg
ggcatcgacaagagcaacgtgcgctgggtgattcactacaacctgcccaaaaacatcgag
ggctactaccaggaaatcggccgtggtggccgcgacggcgcccccgccgaggccgtgctg
ttttacagctacgccgacgtggcccagctgcgcgacatgattaccaaggacgccgacccg
cgcctggcccagctgaacaccaccaagctcgagcgcatgcagcagtttgccgaagcggcc
tcgtgccgccgccgcattttgctggcgtacttcggcgaggtgctcgacaaagactgcggc
aactgcgacatttgccgcaacccgcccgttaccttcgacggtaccgagctggcgcagaag
gcgttgtcggcggtggcgcgcacccgcgagcaggccccgcttacgctcatagccgacgtg
ctgctggggcgccgcaaccaagccgttattggccgcggctacgaccagatcaagaccttc
ggggccggggccaacctctcgtttcttgactggcaaagctacctgcaccagctcctcaac
gacgggctcctgtacattgcctacgagcaaggctacgccctgaagctcaccgacctaggc
tggcaagtactgaagggcgagcggaagcagcagctcaagcaatttcaggtgccggccaag
gccgaaaaagcgcccaagggccgcgccgccaaagccgctgccgggccacgcttggtgtcg
gttaccgacgacctcttcgaccgcctgcgccagctgcgcaaacgcattgccgaccagcag
ggcgtgccgccgtacgtggtgttttcggataccacgctgcaggaaatggccgttgagcgg
ccgcgcacccgcacggccatgctggccatttcgggcgtgggcatgaagaagttcgaaacc
tacggcgagcaatttatccagctcatcaacgagttggccggtgctccctcgcccgacgac
gtgcccgacctaggcgccgacgacgatgtatcggcagcgcccaaaaagcggcccgcgccg
ggcagcactttcgtcgactcctggaagctccaccgccaggggctgtcggtggagcaagtg
gccgagcagcggggcttgtcgccgagcaccgtgaagtcgcacctcgaaacgctgtacgaa
aaaggctaccagctgcgcaccgaggagttcctgaccatggacgacttcgcccagatcaaa
atggcagcccaggagctgggccctgagctgcgcctgcgcgacctattcgaccacctgcgc
gagcggtacgactactttcagctgcgccttgccctgatttacgacaagcgcatgcgcggc
gagctgcccacgcaacctgttgatgcctag
DBGET
integrated database retrieval system
