Hymenobacter oligotrophus: D3Y59_09145
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Entry
D3Y59_09145 CDS
T05656
Name
(GenBank) SDR family oxidoreductase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
hyh
Hymenobacter oligotrophus
Pathway
hyh00521
Streptomycin biosynthesis
hyh00523
Polyketide sugar unit biosynthesis
hyh00525
Acarbose and validamycin biosynthesis
hyh00541
O-Antigen nucleotide sugar biosynthesis
hyh01100
Metabolic pathways
hyh01110
Biosynthesis of secondary metabolites
hyh01250
Biosynthesis of nucleotide sugars
Module
hyh_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
hyh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
D3Y59_09145
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D3Y59_09145
01055 Biosynthesis of vancomycin group antibiotics
D3Y59_09145
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D3Y59_09145
00525 Acarbose and validamycin biosynthesis
D3Y59_09145
Enzymes [BR:
hyh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
D3Y59_09145
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
AYA37202
UniProt:
A0A3B7R0B9
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Position
complement(2129406..2130347)
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AA seq
313 aa
AA seq
DB search
MEKKRVLITGGAGFLGSHLCDRFLAEGYHVIAMDNLVTGDLENIQHLFGKKDFEFHHHDV
SKFVFVPGKLDYILHFASPASPIDYLKIPIQTLKVGSLGTHNLLGLARVKGARMLIASTS
EVYGDPEIHPQVEEYFGNVNPVGPRGCYDEAKRFQEAITMAYHNHHGLETRIVRIFNTYG
PRMRLNDGRVLPAFLSQALRGENLTVFGDGSQTRSFCYVDDLIEGIYRLLLSDYHLPVNI
GNPSEITIKEFGEEIARLTGVEFKPDYKPLPENDPMKRRPDISKAKEVLGWEPKVDRAEG
LRRTLEYFQERVK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaacgcgtactaattacgggtggtgcaggctttttgggctcccacctctgc
gacaggttcttggccgagggttaccatgtaattgccatggataacctcgtgacgggcgac
ttggaaaatattcaacacttgttcggcaaaaaggacttcgagtttcaccatcacgatgtg
tcgaagtttgtgtttgtgcccggcaaactagattacattctacacttcgcctcgccggct
tcccctatcgattacctcaagattcctatccaaaccctaaaagttggttctttaggtacc
cacaacctgctgggcttggcccgcgtgaaaggcgcacgcatgctgattgccagcacttcg
gaggtgtacggagacccggaaattcaccctcaggtggaagaatatttcggcaacgtaaac
ccagtggggcctcgcggctgctacgatgaggccaagcgcttccaggaagccattaccatg
gcttaccacaatcaccacggcttggagacgcgtatcgtgcgcatcttcaatacttatggc
ccgcgcatgcgccttaacgacggccgtgtgctgcctgccttcctgtctcaagccctgcgc
ggcgaaaacctgacagtattcggcgacggttcgcaaactcgttccttctgctacgtcgat
gacctgattgaaggcatctaccgcctgttgctcagcgactatcacttgcccgtaaacatt
ggcaacccgtcggagataactatcaaggagtttggggaggaaattgcccgcctcaccggt
gtggagttcaaacccgactacaaacccttgcccgaaaacgaccccatgaagcgtcgcccc
gatatcagtaaggctaaagaggtgctgggttgggaaccaaaagtagaccgggccgagggg
cttcgtcgcacgttggagtatttccaagagcgcgtaaaataa
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