Hymenobacter oligotrophus: D3Y59_17260
Help
Entry
D3Y59_17260 CDS
T05656
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
hyh
Hymenobacter oligotrophus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
Motif
Other DBs
NCBI-ProteinID:
AYA38641
UniProt:
A0A3B7RCI1
LinkDB
All DBs
Position
complement(4008115..4010421)
Genome browser
AA seq
768 aa
AA seq
DB search
MKRLLLLLLCLLPLLVAAQSVPVPAEIQFAGLRLRLTDGGRAAVQQKVDALRRHPSSFQA
RVALADAAFPIIDRVLQEEGVPLDFRYLCLQESGLQGDAQSIHDAVGYWQFKREAASDFG
LLVNDQVDERKHLVAATHGAAKYLLRSQQMYRNWLNTLLSYNLGPGGVKPYTLPTDATAT
EMEVSEKTHPYILTFLAHKLAYEPAVGTNPRPAMMLREYPAMGGHSLEMLAQAIQTPAAE
LSKHNRWLLAAAVPTDKSYTALVPVTDSLQLLAMAVQQRQAASKLVTKPEVDPTNAAFVT
VNGLRAVVALPGESKEDLAQRTGIKLRKLLQYNDLKPFDQIVIGQPYFVQKKRDKAAVEY
HVAQQGESVASVSQKYGMRSKAIRSKNRMAANEQLQTGRVLWMQHTRPREVAVEYVKDTN
GAVAAALERPVGSPTPAEPVPAPATAPKPAPSKPATINPAPATTASKPAPAQPVQDEPAV
ADATVGTGEAAADSNLENINDVAAPDSAAAPAPSQQPAYASTTAGSNKGLPASAPVADEP
AADAAEEEPVAVVAAPATPASRPAPSTPPASKPAPAPAPAAAPTAAKPTAPTSVPAASAD
KPAPAPAAQAAPAPVATTVEPVPSSGLHTVQPKENVYSIARRFGIRPADIIAWNNLPPSP
ALLIGQVIRVAPPAPSATASAAPAPSAAPAKPAATPAPATKPATPAASAPAASPTAASGA
IKHTVAPGESMYGISRKYGVTIKDIMEWNGKPDFNVRPGEVLVIKPVK
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagactgctgcttttgttgctttgcttgctgccgttgctggtggcggcccagagc
gtacccgtacccgccgaaattcagtttgccggcttgcgcctgcgccttaccgatgggggg
cgggcggccgtgcagcaaaaagtagatgccctgcggcggcacccttcgtcgtttcaggcg
cgggtagccctggccgatgctgctttcccgatcatcgaccgagtgctgcaggaagaaggc
gtacccctcgattttcgctacctctgcttgcaggaaagcggcttgcagggcgatgcgcag
agcattcacgatgcggtgggctactggcagtttaagcgcgaagctgcatcggactttggc
ctactcgtgaacgaccaggttgacgaacgcaagcacctggtagccgcaacccacggcgcg
gccaagtacctgctccgctcgcagcagatgtaccgcaactggttgaacaccctgctcagc
tacaacctagggcccggcggcgtgaaaccttacaccctgcccaccgacgcgacggccacg
gaaatggaagtgtcggagaagacgcacccgtacatcctcacctttctggcccacaagctg
gcctacgagcccgccgtggggaccaacccgcgtccggccatgatgctgcgcgagtatccc
gctatgggaggccactcgttggaaatgctggcgcaggccatccagacgccggcagccgag
ttgagcaagcacaaccgttggctgctagccgccgcggtgcccaccgataagtcgtacacg
gcgctggtgcccgtaaccgactcgctgcaattgctggctatggccgtgcagcagcggcag
gccgcctccaagctggtaaccaagcccgaagttgaccccaccaacgccgcctttgttacc
gtgaacggcctgcgcgccgtggtggcgctgcccggcgagagcaaagaagacctggcccaa
cgcaccggcataaaactgcgcaagctgctgcaatacaacgaccttaagcctttcgatcag
atagtaattggccagccctactttgtgcagaaaaagcgcgacaaggcggccgtggagtac
cacgtggcgcaacaaggcgaaagcgtggcctcggtgtcgcagaagtacggaatgcgcagc
aaggccattcggagcaaaaaccgcatggctgccaacgagcagctgcaaaccggtcgcgta
ctctggatgcagcacacccgcccccgcgaggtggccgtggagtacgtgaaagataccaac
ggggccgtagcggcagctttggagcggccggtaggcagccccactcctgccgaacccgtt
cctgcgccggctactgcgcccaaacctgctccgagcaaaccagccacaatcaaccctgcc
ccggctactacggccagcaaacccgctcccgcgcaaccggtgcaagacgagccggcggta
gccgatgccacggtgggtaccggcgaagctgctgctgattcgaacctcgaaaacatcaac
gatgtggctgcccccgattcggcagcggcaccggcgcccagccagcaacccgcgtacgct
agcaccactgccggcagcaacaaaggacttccggcctctgcgcccgtggccgatgagccc
gccgccgacgcagctgaggaagaacccgtggctgtggtggcggcccccgcaacgccagcc
agccgccccgcgccaagtacgccgcccgccagcaaaccggcaccagctcccgcaccggca
gcagcacccactgcagccaagccaacagcacctacctcggtacctgcagcttcagccgat
aagcccgccccggcccccgctgcgcaagcggctccggccccggttgctaccaccgtagag
ccggtgccgagttcgggcttgcacacggttcagcccaaggagaacgtgtactccattgct
cgccgctttggcattcggccagctgatattattgcctggaacaacctgccccccagcccc
gcgctgctgattgggcaggttatccgggtagcgccgccggcgccgagtgctacggcctcg
gctgctccggcccccagcgcggccccggccaagccggctgctaccccggcaccggccact
aaaccggccacacctgctgcatcggcccctgctgcaagcccaaccgctgcctcgggcgca
atcaagcacacggtagcgcccggcgagtcgatgtatggcatttcgcgcaagtacggcgtt
accatcaaggacatcatggagtggaacggcaaacccgatttcaacgtgcgccccggcgaa
gtactggtcattaagcctgttaaataa
DBGET
integrated database retrieval system
