Hymenobacter oligotrophus: D3Y59_17860
Help
Entry
D3Y59_17860 CDS
T05656
Name
(GenBank) Tn3 family transposase
Organism
hyh
Hymenobacter oligotrophus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_Tn3
DUF4158
Motif
Other DBs
NCBI-ProteinID:
AYA39047
UniProt:
A0A3B7RX39
LinkDB
All DBs
Position
unnamed1:complement(38826..41789)
Genome browser
AA seq
987 aa
AA seq
DB search
MILPFLTAPERQSYQQVPATLSESDLRQHFHLTAADRELIQRQRRDGNRLGCAVQLGLVR
LMGYLPEDWFEQVPAPVAAFVGQQLGIAPEALAAYGERAATRSEHLQLVLRHLSYRKWQP
LDSPGLEAWLLERALEHDQPRLLLQAACQKLHQDRLLRPAISVLELLVSQALLQTDAATY
QRLGPLLTPAVEARLDALLAVDPALRVTPHRWLCQPATANTPAAINQALAKLDFLHQLGL
ADWDTGGLNANRRKRLAHRARHRTSQAIGRYAPAKRYPLLVAFVLESYRDVLDAVLTMFS
DYWAGAQRKAQREHEAHLQAIRQARETALRVFAQVARTVVDEQIPAGLVREAVFETIPRE
QVEQALQAYYALSDTRLDSPLAFLLRRYAHLKQFSANLLRQVSFASAFAGDRFAEALTLV
VELQTGARRKLPADAPTDFITPSWHGFVHPQQVPERLPYELCVLATLRERLRSGDVFVPG
SRKYADLESYLIPAAQWPGLRGEVLRQLGLPEDPRQRLHARLAELEALLPQVTALLAEGG
EVRLEAGELVVTALEAEELPDSLRVLDEHIRARMPVVELTDILVEVDGWTGFSELLREAS
AGTVDDPEPVYAALLAAACNIPLSDMARSTGLDYQTVWWATHQFLHEQPLRAATTRVVNQ
QHRQWLARHWGGGGLSSSDGQRFPVSGAVRNAKALPRYFGYGRGVTFYTHTADHYAQYGS
KVIPATERDATYVLDEVLGNETDVVILEHATDTHGYTDLIFGLFDLLGLQYSPRLRDIGD
QKLCRIRGRELSYPGLHFTGHVQPGYIEARLDDLLRVAGSFKLGYVTASLFISKLQAYPR
QHNLTYVLQQYGRLIKTNFILRYLLHQPLRRKIHVQLNKGEQLHAMRVFLWFGGDGLIRR
KQEEAQQEVVSALNLVTNLVVLWNTVYLQQVVQTLRAEGVEVRDEDLARLSPARYEHINR
LGKYTFPRQVEVQPNGLRSLRKPLETA
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgattttgcctttcctcaccgcgcccgaacggcagagctaccagcaggtgccggctacg
ctcagcgaatcggacctgcgccagcactttcacctgacggcggctgaccgggaattgatc
cagcgccagcgccgcgacggcaaccgcctgggctgcgccgtgcagctgggcctggtgcgc
ctgatgggctatctgcccgaggactggttcgagcaagtgccagcgccagtggccgccttt
gtcggccagcagctgggcatcgcccccgaagccttagccgcctatggggagcgcgccgcc
acccgcagcgagcacctgcagctggtgctgcggcacctgagctaccgcaagtggcagccc
ctggacagccccggcctggaagcgtggctgctggaacgggccctggagcacgaccagccg
cgcctgctcttgcaggccgcctgtcagaagctgcaccaggaccggttgctgcggcccgcc
atctcggtgctggaactgctggtgagccaggccctgctgcaaaccgacgcggcgacgtac
cagcgcctgggcccgctgctcacgccggcggtggaagcgcggctcgacgcgctgctggcg
gtggacccggcgttgcgcgtcacgccgcaccgctggctgtgccagccggcgacggccaac
acgcctgcggccatcaaccaggccctggccaagctggacttcctgcaccagctgggcctg
gccgactgggacacgggcgggctgaacgccaaccggcgcaagcgcctggcccaccgggcg
cgccaccgcaccagccaggccatcggccgctacgcgccggccaagcgctacccgctgctg
gtcgccttcgtgctggaatcctaccgcgacgtgctcgacgcggtgctgaccatgttcagc
gactactgggccggggctcagcgcaaggcccaacgcgagcacgaggcgcacctgcaggcc
attcgccaggcccgcgaaacggccctgcgcgtcttcgcccaggtggcgcgcacggtcgtc
gacgagcagatcccggccgggctggtgcgagaagccgtgtttgagactattccgcgggag
caggtcgagcaggccctgcaggcctactatgccctgagcgacacccgcctcgattcgccc
ctggcgtttttgctgcggcgctacgcgcacctgaagcagttctcggccaacctgctgcgg
caggtctcgtttgccagcgcctttgccggcgaccggttcgccgaggccctgaccctggtg
gtggagttgcagaccggcgcgcggcgcaagctgccggccgatgcaccaaccgacttcatc
acgccttcctggcacgggtttgtgcacccgcagcaggtgccggaacggttgccgtacgaa
ctgtgcgtgctggccaccctgcgcgagcggctgcgctcgggcgacgtgttcgtgcccggc
tcgcgcaaatacgccgacctggagagctacctgattccggccgcccagtggcccggcctg
cgcggggaggtgctgcgccagctggggttaccggaggacccgcgtcagcgcctgcacgcc
cgcctggccgaactcgaagcgctgctgccgcaggtgacggccctgctggccgaaggcggc
gaggtacgcctggaagcgggcgaattggtggtgacggcgctggaggctgaggaattgccg
gactcgctccgggtgctggacgaacacattcgcgcccgcatgccggtggtcgaactgacc
gacattctggtcgaggtggacggctggaccggtttctcggagctgctgcgcgaggcatcg
gctgggactgttgacgacccggagccggtgtacgccgccctgttggcggccgcctgcaac
atcccgttgtccgacatggcccgcagcacggggctggactaccaaacggtctggtgggct
acccaccagtttttgcacgagcagccgctgcgggcggccaccacccgcgtggtcaaccag
cagcaccgccagtggctggcccggcactggggcgggggcggcctgtcctcctcggacggg
cagcgcttccccgtcagcggagccgtgcgcaacgccaaagccttgccgcgctacttcggc
tacggccgcggcgttacgttttatacccacacggccgaccactacgcccagtacggcagc
aaagtcatcccggccaccgagcgcgacgcgacctacgtgctggatgaagtgttgggcaac
gaaaccgacgtggtcatcctcgagcatgccaccgacacacacggctacacggacctgatt
ttcgggctctttgacctgctgggcttgcaatactcgccgcgtctgcgcgacatcggcgac
cagaagctctgccgcatccggggccgggagctgagctacccgggcctgcacttcaccggc
cacgtgcagcccggctacatcgaggcccgcctggacgacctgctgcgggtggccggctcg
ttcaagctgggctacgtgacggcttcgctcttcattagcaagctgcaggcctacccgcgc
cagcacaacctgacctacgtgctgcagcagtacgggcggctcatcaaaaccaatttcatc
ctgcgttacctgctccatcagcccttgcggcgcaagattcacgtgcagctcaacaagggc
gagcagctgcacgcgatgcgggtgttcctctggttcgggggcgacgggctcatccgccgc
aagcaggaagaagcccagcaggaggtcgtcagcgccctgaacctggtcaccaacctggtg
gtgctctggaacacggtctatctgcagcaggtggtgcagacgctacgggcggagggcgtg
gaggtgcgcgacgaagacttggcccggctctcgcccgcccgttatgagcacatcaaccgg
ttgggcaagtacacctttcctcgccaggtagaagtacagcccaacgggctgcgcagcctg
cgaaaaccactggaaacggcttag
DBGET
integrated database retrieval system
