Hymenobacter yonginensis: O9Z63_15115
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Entry
O9Z63_15115 CDS
T08743
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
hyk
Hymenobacter yonginensis
Pathway
hyk00521
Streptomycin biosynthesis
hyk00523
Polyketide sugar unit biosynthesis
hyk00541
O-Antigen nucleotide sugar biosynthesis
hyk01100
Metabolic pathways
hyk01110
Biosynthesis of secondary metabolites
hyk01250
Biosynthesis of nucleotide sugars
Module
hyk_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
hyk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
O9Z63_15115 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
O9Z63_15115 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
O9Z63_15115 (rfbC)
Enzymes [BR:
hyk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
O9Z63_15115 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WBO83699
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Position
complement(3499664..3500206)
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AA seq
180 aa
AA seq
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MEFKYFDIAGAVEILPRVFGDVRGAFFESFSERRLAEAGISGEWVQDNQSRSDRGVVRGL
HFQKPPFAQAKLVRVASGRALDVIVDIRRDSPTYGQHLSIELDSERFNMLYVPVGFAHGF
TALEDNTLFLYKCTNYYAPESEGGLLWNDPTLGINWGVQNPTISAKDQVLPTLAEFNSPF
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaagtattttgatattgccggggcagtggaaatcctgccgcgcgtattcggg
gatgtccgaggcgcctttttcgagtcgttcagtgagcggcggctggccgaagccggcatc
agcggcgagtgggtgcaggacaaccagtcgcgctccgaccggggcgtggtgcggggtctg
cacttccagaagccgcccttcgcccaggccaagctggtgcgcgtagccagcggccgcgca
ctcgatgtgatagtggatatccgccgcgactcgcccacttacggtcagcatctgtcgata
gagctggattcggagcgcttcaacatgctgtacgtgcccgtaggcttcgcgcacggcttc
acggccctagaagacaacacgctgttcctgtataagtgcaccaactactacgcccccgaa
tcggaaggcggcctgctctggaacgaccccacgctgggcatcaactggggcgtgcagaac
cccaccatctccgccaaagaccaagtgcttcccacgctggccgagttcaactctccattt
taa
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