Hydrogenophaga sp. BPS33: F9K07_14330
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Entry
F9K07_14330 CDS
T06379
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
hyn
Hydrogenophaga sp. BPS33
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyn03019
]
F9K07_14330
03009 Ribosome biogenesis [BR:
hyn03009
]
F9K07_14330
Messenger RNA biogenesis [BR:
hyn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
F9K07_14330
Ribosome biogenesis [BR:
hyn03009
]
Prokaryotic type
rRNA processing factors
F9K07_14330
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
QHE85997
UniProt:
A0A6P1J0V5
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All DBs
Position
3107040..3108599
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AA seq
519 aa
AA seq
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MSQDILINWSPQETRVAVVELGAVQEVHLERTLERGLVGNIYLGKVSRVLPGMQSAFIDI
GLDRAAFLHVADLMPNIAAKHATPRASAPVAPVPPAAADAAVAATTAPKVLTPNPVLPIE
RQIFEGQALMVQVLKDPIGTKGARLTAQISIAGRLLVFLPQDNHIGVSQKIPPAQREALR
QRLVRLTANPDGSPAGGFILRTNAEDATDEELVEDTAYLRKTWLRIKDAATRQPPATLLH
EDLNLMQRVLRDLVGADTQSIRIDSREQHGLLLGFAGEFMPDTVKKLQHYSGERPIFDLY
NIDEDIVRALSRRVDLKSGGYLVIDQTEALTTVDVNTGGFVGARNFDDTVFRTNLEAAQA
IARQLRLRNLGGIVIVDFIDMVRDDHRDAVLTEFRKQIARDRVKTMIGGFSQLGLLEMTR
KRTRESLAHMLSESCEACAGRGVVKTARSVCYDILREILREARAFNPREFRVVGSPKVIE
LFLDEERAHLAGLSDFIGKPISLQSEGSMTQEQYDIVLL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggacattctgatcaattggtcgccgcaggaaacgcgcgtggccgtggtggag
ctgggggccgtgcaggaggtacacctggaacgcacgctggagcgcggcctggtcggcaac
atctacctgggcaaggtctcgcgcgtgctgcctggcatgcagtccgccttcatcgacatc
gggctggaccgtgccgcgtttctgcacgtggccgatctcatgcccaacatcgccgccaag
catgccacgccgcgcgccagcgccccggtggcaccggtacccccggctgcggccgacgcg
gcggtggccgccaccaccgcccccaaagtgctcacgcccaacccggtgttgccgatcgag
cgccagattttcgaaggccaggcgctgatggtgcaggtgctcaaggaccccatcggcacc
aagggcgcgcgtctcacggcgcagatcagcattgccggccgcttgctggtgttcctgccg
caggacaaccacatcggtgtctcgcaaaagatcccgcccgcgcagcgcgaggccttgcgc
cagcggctggtgcgcctgacggccaaccccgatggcagccccgcgggcggcttcatcctg
cgcaccaacgccgaagacgccaccgatgaggaactggtggaggacacggcgtacctgcgc
aagacctggctgcgcatcaaggatgcggccacgcgccagccaccggccacgctgctgcac
gaagacctgaacctgatgcagcgcgtgctgcgcgatctcgtgggggcggacacgcagtcc
atccgcatcgactcgcgcgagcagcatggcctgctgctcggctttgcgggcgagttcatg
cccgacacggtcaagaagctgcagcactacagcggcgagcggccgatcttcgacctgtac
aacatcgacgaagacatcgtgcgcgcgctcagccgccgggtcgacctgaagtcgggtggc
tacctggtgatcgaccagaccgaggcgttgaccacggtggacgtgaacaccggtggcttc
gtgggggcgcgcaacttcgacgacacggtgttccgcaccaacctggaggccgcgcaagcc
atcgcgcgccagctgcgcctgcgcaacctgggcggcatcgtgatcgtggacttcatcgac
atggtgcgcgacgaccaccgcgatgcggtgctgaccgaattccgcaagcagatcgcgcgc
gaccgcgtaaagaccatgatcggtggcttctcccaactgggcctgctggagatgacgcgc
aagcgcacgcgcgagtcgctggcccacatgctcagcgaatcctgcgaagcctgcgccggc
aggggcgtggtaaagaccgcgcgcagcgtgtgctacgacatcctgcgcgagatcctgcgc
gaggcccgcgcctttaacccgcgcgaattccgcgtggtcggctcgcccaaggtgatcgaa
ctctttctggacgaggagcgggcgcatctcgcgggcctgtccgatttcatcggcaaaccg
atctcgctgcagagcgaaggatcgatgacgcaggagcagtacgacatcgtgctgctctga
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