Hydrogenimonas sp. MAG: NNO_0302
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Entry
NNO_0302 CDS
T05789
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
hyo
Hydrogenimonas sp. MAG
Pathway
hyo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NNO_0302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyo03400
]
NNO_0302
DNA repair and recombination proteins [BR:
hyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NNO_0302
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NNO_0302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
SWI2_SNF2
Microtub_bd
DUF87
AAA_14
Motif
Other DBs
NCBI-ProteinID:
BBG65005
UniProt:
A0A3G9GWN6
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Position
complement(249531..251501)
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AA seq
656 aa
AA seq
DB search
MLFELKSDFKPAGDQPQAIKLLTNSIEAGNRYQTLLGVTGSGKTFTMAQIIQNLQIPTLI
MTHNKTLAAQLYSEFKGFFPDNHVEYFISYYDYYQPEAYIPRQDLFIEKDSSINDELERL
RLSATASLLSYDDVIVVASVSANYGLGNPIEYKKMVQKLEIGDEIDQRTLLLRLVEMGYK
RNDNFFDRGDFRLSGDVVDIYPAYSEEEALRIEFFGDEIEAIYTFDPLTNRKISDLKTTT
IYAASNFIVGGDKLQQAIKSIEEELAERLAWFKKEGKLLEYQRLKQRTEFDLEMLETTGM
CKGIENYARHLTDKKPGETPYSLLDYFELKGRPYLIIVDESHVSLPQFRGMYAGDRSRKE
VLVEYGFRLPSALDNRPLRFEEFIEKAPHYLFVSATPAELEIGLSAVVAEQIIRPTGLLD
PEVEVVDSRYQVEHLYDEIKKVVERGERVLVTVLTKKMAEELTTYYNDLGLRVKYMHSDI
DAIERNQIIRSLRTGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSETALIQTMG
RAARNLNGRVIMYAQKMTDSMKNAIDITLHRRKRQKLYNEEHGITPKSVGRRLDENLRLE
DHGILYQKSSKIEKMPAKERQKIVKELTKKMKEAAKRLEFEEAARLRDEIEKIKKL
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
ttgcttttcgaactaaagagcgatttcaagccggcgggagatcagccgcaggcgataaaa
cttttaaccaactccatagaggccggcaaccgctaccagacactgctgggggtgacgggc
agcggaaagaccttcactatggcgcagatcattcagaacctgcagataccgacactgata
atgacgcacaacaaaaccctggcggcacagctctacagtgaattcaaaggcttctttcct
gacaaccatgtggagtatttcataagctactacgactactaccagcccgaagcctacata
ccgaggcaggacctcttcatagagaaggacagctccataaacgacgagttggagcgccta
aggctaagcgccaccgcctccctgctgagctacgacgacgtaatcgtggtcgcatcggtc
tcggccaactacggactcggaaacccgatcgagtacaaaaagatggtccagaagctggaa
atcggcgacgagatcgaccagcgcaccctccttttgagactcgtggagatgggctacaag
agaaacgacaacttcttcgaccgcggtgatttccgcctcagcggcgacgtggtggatatc
taccccgcctacagcgaagaggaggcgttgcgcatcgagttcttcggcgacgagatcgag
gcgatctacaccttcgacccgctcaccaatagaaaaatctccgacctcaaaacgaccacg
atctatgccgccagcaacttcatagtgggaggcgacaagcttcagcaggccatcaagagc
atagaggaggagctcgccgaaagactcgcctggttcaagaaggagggtaagcttctggag
tatcagcgcctcaaacagcggacggaattcgacctggagatgctggagactacgggtatg
tgcaagggtatcgagaactatgcccgccaccttacggacaaaaagccgggagagacaccg
tactccctgctcgactacttcgagctgaaaggcagaccatacctgataatcgtagacgaa
tcgcatgtgagtctgccgcagtttcggggaatgtacgcaggggacagaagcagaaaagag
gttctcgtggagtacggcttcaggcttccgagcgctctggacaaccgccctttgaggttc
gaagagttcatagagaaggcaccccactacctcttcgtctccgcgacaccggcggagctg
gagatagggctgagcgcggttgtcgcggagcagatcatccgccccacgggtctgctcgac
ccggaggtggaggttgtagacagcagataccaggtagagcacctctacgacgaaatcaaa
aaggtcgtcgaacgcggagagagggtgcttgtcacggtactcacgaagaagatggccgaa
gagctgaccacctactacaacgacctgggacttcgggtgaagtatatgcactcggatatc
gacgccatagagcggaaccagatcatcagaagcctcagaacgggcgaattcgacgtcctc
gtagggataaacctgctcagagaggggctcgatcttccggaagtcagcctcgtggcgatc
ctggatgccgacaaagagggctttctacgctcggaaactgcgcttatacagacgatgggg
cgtgcagccagaaacctcaacggcagggtgataatgtatgcacaaaagatgaccgactcg
atgaaaaatgccatagatataaccctgcacagaagaaaaaggcagaagctctacaacgag
gagcacggcataacacccaaatcggttggaagacggctagatgagaacctaaggctcgaa
gaccacggcattctgtatcaaaagagtagcaaaatagagaagatgccggcgaaagagcgc
cagaagatagtaaaagagttgacaaaaaagatgaaagaggctgccaaaagattggagttc
gaggaggctgcacggctgagagacgagatagagaagataaaaaagctgtaa
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