KEGG   Hydrogenophaga sp. RAC07: BSY239_1928
Entry
BSY239_1928       CDS       T04455                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
hyr  Hydrogenophaga sp. RAC07
Pathway
hyr00010  Glycolysis / Gluconeogenesis
hyr00020  Citrate cycle (TCA cycle)
hyr00260  Glycine, serine and threonine metabolism
hyr00280  Valine, leucine and isoleucine degradation
hyr00310  Lysine degradation
hyr00380  Tryptophan metabolism
hyr00620  Pyruvate metabolism
hyr00630  Glyoxylate and dicarboxylate metabolism
hyr00640  Propanoate metabolism
hyr00785  Lipoic acid metabolism
hyr01100  Metabolic pathways
hyr01110  Biosynthesis of secondary metabolites
hyr01120  Microbial metabolism in diverse environments
hyr01200  Carbon metabolism
hyr01210  2-Oxocarboxylic acid metabolism
hyr01240  Biosynthesis of cofactors
Module
hyr_M00009  Citrate cycle (TCA cycle, Krebs cycle)
hyr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hyr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
hyr_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:hyr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    BSY239_1928 (lpdA)
   00020 Citrate cycle (TCA cycle)
    BSY239_1928 (lpdA)
   00620 Pyruvate metabolism
    BSY239_1928 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    BSY239_1928 (lpdA)
   00640 Propanoate metabolism
    BSY239_1928 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BSY239_1928 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    BSY239_1928 (lpdA)
   00310 Lysine degradation
    BSY239_1928 (lpdA)
   00380 Tryptophan metabolism
    BSY239_1928 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    BSY239_1928 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hyr04147]
    BSY239_1928 (lpdA)
Enzymes [BR:hyr01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     BSY239_1928 (lpdA)
Exosome [BR:hyr04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   BSY239_1928 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA FAD_binding_2 Biotin_lipoyl_2 Thi4 PYNP_C NAD_binding_8 Pyr_redox_3 HI0933_like GCV_H FAD_binding_3 AlaDh_PNT_C DAO DEC-1_N HlyD_D23 RnfC_N HlyD_3
Other DBs
NCBI-ProteinID: AOF84455
UniProt: A0A1B3LUC4
LinkDB
Position
complement(2039909..2041738)
AA seq 609 aa
MAIIEIQVPDIGDFDEVAVIELLVKPGDTVKAEQSLITVESDKASMEIPSSAAGVVKELK
VKLGDKVKQGSVVLTLEAAGVAAAAPAPTAAPAASPAPVAAAPAAAAPTGSAFAGSADLD
CDVLVLGGGPGGYSAAFRAADLGLKVVLVERYATLGGVCLNVGCIPSKALLHVAAVMDEV
SHMADLGVDFGRPVVNIEKLRGHKEKVIGKLTGGLAAMAKMRKVTTVRGYGAFVGANHLE
VEETSGTAQDKTGKKQVIAFKKAIIAAGSQAVRLPFMPEDPRVVDSTGALALKEVPKRML
ILGGGIIGLEMGTVYSTLGARLDVVEMLDGLMQGADRDLVKIWQKMNAKRFDNIMLKTKT
VGAKATAEGIEVTFAAAEEGGTAPAPQVYDLVLQAVGRTPNGKKIAAEKAGVAVTDRGFI
NVDIQMRTNVPHIFAIGDIVGQPMLAHKAVHEAHVAAEVIAGELQGNQELASAAFNARVI
PSVAYTDPEVAWVGLTEDQAKAQGIKVKKGLFPWTASGRAIANGRDEGVTKLLFDDSPEA
HGHGKILGGGMVGTHAGDMIGEVALAIEMGADAVDIGKTIHPHPTLGESIGMAAEIAHGS
CTDVPPARK
NT seq 1830 nt   +upstreamnt  +downstreamnt
atggcgatcattgaaatacaagtgcccgacattggcgacttcgacgaagtcgcggtgatc
gaactcctggtgaaacccggcgatacagtgaaggcggagcaatcgctcatcacggtggaa
agcgacaaggcctcgatggagattccctccagcgctgcgggtgtggtgaaggaactcaag
gtcaagctgggcgacaaggtcaagcagggcagtgtggtgttgacgctggaggcggcgggt
gtcgccgctgcggcgcctgcacccacggccgcccctgcggcctccccagcgcccgttgcc
gccgcaccggccgcagctgcgccaaccggttctgctttcgccggctccgccgacctcgac
tgcgacgtgctcgtgctcggcggcggccccggtggctacagcgcagccttccgcgccgcc
gacctcggcctcaaggtcgtgctggtcgagcgctacgccaccttgggtggtgtgtgcctg
aacgtgggttgcattccgtccaaggcactgctgcacgtggcggcggtcatggacgaggtc
agccacatggccgacctcggagtggacttcggccgcccggtggtcaacatcgagaagctg
cgcggccacaaggaaaaggtcatcggcaagctcaccggcggcctggccgccatggccaag
atgcgcaaggtcaccacggtgcgtggctacggtgccttcgtcggtgccaaccacctggag
gtggaagaaaccagtggcacggcgcaggacaagaccggcaagaagcaggtgattgcgttc
aagaaggccatcatcgcggccggttcgcaagctgtgcgcctgcccttcatgcccgaggat
ccgcgtgtggtggacagcaccggtgcgctggcactcaaggaagtgcccaagcgcatgctg
attctgggcggcggcatcatcggcctggagatgggcaccgtctacagcacgctgggcgcg
cgcctggacgtggtggaaatgctcgacggcctgatgcagggcgccgaccgcgacctcgtg
aagatctggcaaaagatgaacgccaagcgcttcgacaacatcatgctcaagaccaagacg
gtgggggccaaggccactgcggagggcatcgaggtgacgtttgccgccgccgaagaaggc
ggcacggcgcccgcgccacaggtgtacgacctggtgctgcaggccgtgggccgcacgccc
aacggcaagaagatcgcggccgagaaggccggcgtggcggtgacggaccgtggcttcatc
aatgtcgacatccagatgcgcaccaacgtgccgcacatcttcgccatcggcgacatcgtg
gggcagcccatgctggcgcacaaggcggtgcacgaagcgcatgtggcggccgaggtgatc
gcaggggaactgcagggcaaccaggagctggcctcggccgcgttcaacgcccgcgtgatc
cccagcgtggcttacaccgaccccgaggtggcctgggtgggcctcaccgaagaccaggcc
aaggcccaaggcatcaaggtcaagaagggcctgttcccgtggacggcctctggccgcgcc
attgccaacgggcgcgacgaaggcgtgaccaagctgctgtttgacgactcacccgaggcg
cacggccacggcaagatcctgggtggcggcatggtcggcacgcacgcgggcgacatgatc
ggtgaagtcgcacttgccatcgagatgggcgccgacgctgtggacattggcaagaccatc
cacccgcaccccacgctgggcgagagcatcggcatggcggctgaaatcgcacacgggagc
tgcaccgacgtgccgccggcccgcaaatag

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